RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 GPR85P60893 370 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 GRIN1Q05586 938 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 KIZQ2M2Z5 673 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 PRAMEF18Q5VWM3 479 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 STYK1Q6J9G0 422 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 KCNJ15Q99712 375 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 ZFYVE21Q9BQ24 234 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 TANGO6Q9C0B7 1094 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 CROTQ9UKG9 612 aa5.29□□□□□ -1.56
HMGB1P33-201ENST00000563485 K7ESM1 405 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 U2SURPO15042 1029 aaKnown RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 NKRFO15226 690 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 ADCY3O60266 1144 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 LTFP02788 710 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 GNAT1P11488 350 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 MLLT6P55198 1093 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 PROSER1Q86XN7 944 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 IFNL3Q8IZI9 196 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 TTLL11Q8NHH1 800 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 UHMK1Q8TAS1 419 aaKnown RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 CLEC4DQ8WXI8 215 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 ZCCHC14Q8WYQ9 949 aaKnown RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 ZNF669Q96BR6 464 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 TMEM209Q96SK2 561 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 PPP1R1BQ9UD71 204 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 PFDN2Q9UHV9 154 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
HMGB1P33-201ENST00000563485 SOD2P04179 222 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 ADRB1P08588 477 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 IL13P35225 146 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 KIAA2012Q0VF49 1180 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 TUSC3Q13454 348 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 RASGRF1Q13972 1273 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 MTERF2Q49AM1 385 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 PHF19Q5T6S3 580 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 FOXB2Q5VYV0 432 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 TRIM48Q8IWZ4 208 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 LCORQ96JN0 433 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 YTHDC1Q96MU7 727 aaKnown RBP5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 INVSQ9Y283 1065 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 TELO2Q9Y4R8 837 aa5.27□□□□□ -1.57
HMGB1P33-201ENST00000563485 DIAPH1O60610 1272 aaKnown RBP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 CYP1A1P04798 512 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 ITGB3P05106 788 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 SSRP1Q08945 709 aaKnown RBP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 SPIRE1Q08AE8 756 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 TBC1D10BQ4KMP7 808 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 HABP4Q5JVS0 413 aaKnown RBP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 BORAQ6PGQ7 559 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 HHIPL2Q6UWX4 724 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 FAM124AQ86V42 546 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 LGI4Q8N135 537 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 L2HGDHQ9H9P8 463 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 HSPBP1Q9NZL4 362 aa5.26□□□□□ -1.57
HMGB1P33-201ENST00000563485 C9orf118A6NHY6 69 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 FAM47E-STBD1D6RA91 191 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 PLATP00750 562 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 FAHP16930 419 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 GTF2F1P35269 517 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 PAN2Q504Q3 1202 aaKnown RBP5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 FAM209AQ5JX71 171 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 VASNQ6EMK4 673 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 DTX3Q8N9I9 347 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 MBD6Q96DN6 1003 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 WRNIP1Q96S55 665 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 CDC6Q99741 560 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 ALG1Q9BT22 464 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 CCDC113Q9H0I3 377 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 CNOT11Q9UKZ1 510 aaKnown RBP5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 DSEQ9UL01 958 aa5.25□□□□□ -1.57
HMGB1P33-201ENST00000563485 TRBV23-1A0A0A0MS06 115 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 B4GALT3O60512 393 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 CYP7B1O75881 506 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 COL6A1P12109 1028 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 ZNF827Q17R98 1081 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 NBPF6Q5VWK0 638 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 TRMT10BQ6PF06 316 aaKnown RBP5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 KCTD1Q719H9 257 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 MTDHQ86UE4 582 aaKnown RBP5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 SCUBE1Q8IWY4 988 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 ZBTB38Q8NAP3 1195 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 SH3RF2Q8TEC5 729 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 EXOC2Q96KP1 924 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 NBPF4Q96M43 638 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 C8orf37Q96NL8 207 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 TMEM168Q9H0V1 697 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 DLL4Q9NR61 685 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 SIRPGQ9P1W8 387 aa5.24□□□□□ -1.57
HMGB1P33-201ENST00000563485 TCRBV5S4A2TA0A5A2 114 aa5.23□□□□□ -1.57
HMGB1P33-201ENST00000563485 CKMP06732 381 aa5.23□□□□□ -1.57
HMGB1P33-201ENST00000563485 C6orf222P0C671 652 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P33-201ENST00000563485 FAM153BP0C7A2 387 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms