RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 CCDC12Q8WUD4 166 aaPredicted RBP21.76■■□□□ 1.07
TRADD-203ENST00000563348 CTAGE1Q96RT6 745 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 GPR20Q99678 358 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 LARP6Q9BRS8 491 aaKnown RBP21.76■■□□□ 1.07
TRADD-203ENST00000563348 SLC26A6Q9BXS9 759 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 ANO3Q9BYT9 981 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 TMEM260Q9NX78 707 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 PITPNM1O00562 1244 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 KCNA2P16389 499 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 SMAD3P84022 425 aaKnown RBP21.75■■□□□ 1.07
TRADD-203ENST00000563348 MTMR1Q13613 665 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 RPUSD2Q8IZ73 545 aaKnown RBP21.75■■□□□ 1.07
TRADD-203ENST00000563348 PGBD1Q96JS3 809 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 MXRA8Q9BRK3 442 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 C6orf50Q9HD87 102 aa21.75■■□□□ 1.07
TRADD-203ENST00000563348 LAMA2P24043 3122 aaKnown RBP21.75■■□□□ 1.07
TRADD-203ENST00000563348 H3BRB1 525 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 PPFIA3O75145 1194 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 FGBP02675 491 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 LGALS2P05162 132 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 GNA11P29992 359 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 SREBF1P36956 1147 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 BFSP2Q13515 415 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 RASIP1Q5U651 963 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 JAKMIP3Q5VZ66 844 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 FAM109BQ6ICB4 259 aaPredicted RBP21.74■■□□□ 1.07
TRADD-203ENST00000563348 RETREG2Q8NC44 543 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 VWCEQ96DN2 955 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 IL17RAQ96F46 866 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 SCLYQ96I15 445 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 TUT1Q9H6E5 874 aaKnown RBP21.74■■□□□ 1.07
TRADD-203ENST00000563348 TELO2Q9Y4R8 837 aa21.74■■□□□ 1.07
TRADD-203ENST00000563348 IQCF3P0C7M6 154 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 CEP55Q53EZ4 464 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 MCTP2Q6DN12 878 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 DEFB123Q8N688 67 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 CYP2W1Q8TAV3 490 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 HERVK_113Q902F9 699 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 KCNH7Q9NS40 1196 aa21.73■■□□□ 1.07
TRADD-203ENST00000563348 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.72■■□□□ 1.07
TRADD-203ENST00000563348 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.72■■□□□ 1.07
TRADD-203ENST00000563348 MEIS1O00470 390 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 CPLX1O14810 134 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 SP4Q02446 784 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 SSRP1Q08945 709 aaKnown RBP21.72■■□□□ 1.07
TRADD-203ENST00000563348 CPLX2Q6PUV4 134 aaKnown RBP21.72■■□□□ 1.07
TRADD-203ENST00000563348 Q7L0L9 218 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 TRIM22Q8IYM9 498 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
TRADD-203ENST00000563348 ADAMTS3O15072 1205 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 SEC24BO95487 1268 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 RFC2P35250 354 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 ARHGAP4P98171 946 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 ZNF200P98182 395 aaPredicted RBP21.71■■□□□ 1.07
TRADD-203ENST00000563348 STK3Q13188 491 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
TRADD-203ENST00000563348 REXO1Q8N1G1 1221 aaKnown RBP21.71■■□□□ 1.07
TRADD-203ENST00000563348 CCDC155Q8N6L0 562 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 CCDC148Q8NFR7 591 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 BICD2Q8TD16 824 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 CRYGNQ8WXF5 182 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 SEPT1Q8WYJ6 367 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
TRADD-203ENST00000563348 SH3GLB2Q9NR46 395 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
TRADD-203ENST00000563348 GSTTP1A0A1W2PQM5 241 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 PFKMP08237 780 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 CYP3A4P08684 503 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 ARP10275 920 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 ZNF76P36508 570 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 RBL2Q08999 1139 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 PTK7Q13308 1070 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 HIC1Q14526 733 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 NIPA1Q7RTP0 329 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 AFAP1L1Q8TED9 768 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 MTIF3Q9H2K0 278 aaKnown RBP21.7■■□□□ 1.06
TRADD-203ENST00000563348 MTMR10Q9NXD2 777 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 VPS54Q9P1Q0 977 aa21.7■■□□□ 1.06
TRADD-203ENST00000563348 C17orf102A2RUQ5 167 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 DEXIO95424 95 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 SMIM10L2AP0DMW4 78 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 SMIM10L2BP0DMW5 78 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 HOXC8P31273 242 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 TCF7P36402 384 aaPredicted RBP21.69■■□□□ 1.06
TRADD-203ENST00000563348 ANKRD1Q15327 319 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 OTOP2Q7RTS6 562 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 TRIM50Q86XT4 487 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 SLKQ9H2G2 1235 aaPredicted RBP21.69■■□□□ 1.06
TRADD-203ENST00000563348 RNPEPQ9H4A4 650 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 AGO4Q9HCK5 861 aaKnown RBP21.69■■□□□ 1.06
TRADD-203ENST00000563348 CXXC1Q9P0U4 656 aaPredicted RBP21.69■■□□□ 1.06
TRADD-203ENST00000563348 ZNF215Q9UL58 517 aaPredicted RBP21.69■■□□□ 1.06
TRADD-203ENST00000563348 TPCN1Q9ULQ1 816 aa21.69■■□□□ 1.06
TRADD-203ENST00000563348 PFKFB2O60825 505 aa21.68■■□□□ 1.06
TRADD-203ENST00000563348 SELPP16109 830 aa21.68■■□□□ 1.06
TRADD-203ENST00000563348 SCRN1Q12765 414 aa21.68■■□□□ 1.06
TRADD-203ENST00000563348 TRIM71Q2Q1W2 868 aaKnown RBP21.68■■□□□ 1.06
TRADD-203ENST00000563348 DEFB128Q7Z7B8 93 aa21.68■■□□□ 1.06
TRADD-203ENST00000563348 JPH1Q9HDC5 661 aaPredicted RBP21.68■■□□□ 1.06
TRADD-203ENST00000563348 NFASCO94856 1347 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms