RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ITGB5P18084 799 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 CLK2P49760 499 aaKnown RBP14□□□□□ -0.17
NSMCE1-204ENST00000563273 ADCY7P51828 1080 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 PTK7Q13308 1070 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 CYFIP1Q7L576 1253 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
NSMCE1-204ENST00000563273 GPR20Q99678 358 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 JADE2Q9NQC1 790 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 CYP46A1Q9Y6A2 500 aa14□□□□□ -0.17
NSMCE1-204ENST00000563273 SMCO2A6NFE2 343 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 H3BRB1 525 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 LGALS2P05162 132 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 KCNA2P16389 499 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 IFNAR1P17181 557 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 DNAJB2P25686 324 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 PDIA3P30101 505 aaKnown RBP13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 SREBF1P36956 1147 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 MTMR1Q13613 665 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 NTRK3Q16288 839 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 SCLYQ96I15 445 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 RNF26Q9BY78 433 aaPredicted RBP13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 ZMYND12Q9H0C1 365 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
NSMCE1-204ENST00000563273 ACTN1P12814 892 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 SELPP16109 830 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 ANAPC15P60006 121 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 RAB30Q15771 203 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 PKN1Q16512 942 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 SERINC5Q86VE9 423 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 FAM177A1Q8N128 213 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 GUCD1Q96NT3 240 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 MXRA8Q9BRK3 442 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 ANO3Q9BYT9 981 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 NAP1L2Q9ULW6 460 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-204ENST00000563273 ATP9AO75110 1047 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CAND2O75155 1236 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 BAIAP3O94812 1187 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CXCL10P02778 98 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 GNAT1P11488 350 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CKBP12277 381 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 GNA11P29992 359 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 AKAP17AQ02040 695 aaKnown RBP13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CEP55Q53EZ4 464 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 LRRC8DQ7L1W4 858 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 SEPT1Q8WYJ6 367 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 IL17RAQ96F46 866 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 TTYH1Q9H313 450 aaPredicted RBP13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 CXXC1Q9P0U4 656 aaPredicted RBP13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 SLC4A7Q9Y6M7 1214 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 COL6A3P12111 3177 aa13.97□□□□□ -0.17
NSMCE1-204ENST00000563273 NFASCO94856 1347 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 MEIS1O00470 390 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 SORBS3O60504 671 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 CYP3A4P08684 503 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 SMIM10L2AP0DMW4 78 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 SMIM10L2BP0DMW5 78 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 BICD2Q8TD16 824 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 PPP1R13LQ8WUF5 828 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 TIFAQ96CG3 184 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 PBX4Q9BYU1 374 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 C6orf50Q9HD87 102 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 KCNH7Q9NS40 1196 aa13.96□□□□□ -0.17
NSMCE1-204ENST00000563273 EMSYQ7Z589 1322 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 ADAM17P78536 824 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 GPNMBQ14956 572 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 SLC9A7Q96T83 725 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 RNPEPQ9H4A4 650 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 MSRAQ9UJ68 235 aa13.95□□□□□ -0.18
NSMCE1-204ENST00000563273 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 EFCAB14O75071 495 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 LGR5O75473 907 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 HIC1Q14526 733 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 CPLX2Q6PUV4 134 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 RPAINQ86UA6 219 aa13.94□□□□□ -0.18
NSMCE1-204ENST00000563273 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms