RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 DHX15O43143 795 aaKnown RBP15.65■□□□□ 0.1
CLK3-209ENST00000562670 RGS20O76081 388 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 PLCG1P19174 1290 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 RPA1P27694 616 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 ADORA2AP29274 412 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 CDC25AP30304 524 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 SEMA3FQ13275 785 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 GRB10Q13322 594 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 IRF5Q13568 498 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 POSTNQ15063 836 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 ZNF792Q3KQV3 632 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 NT5DC1Q5TFE4 455 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 PLEKHH3Q7Z736 793 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 SPATA20Q8TB22 786 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 CAPNS2Q96L46 248 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 KBTBD4Q9NVX7 518 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 SPATA31C2B4DYI2 1134 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 CAVIN2O95810 425 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 TGFB3P10600 412 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 KCNA2P16389 499 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 KRT76Q01546 638 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 PDE4DQ08499 809 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 ITGB3BPQ13352 177 aaPredicted RBP15.64■□□□□ 0.09
CLK3-209ENST00000562670 GSE1Q14687 1217 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 KCNV1Q6PIU1 500 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 MSL3Q8N5Y2 521 aaKnown RBP15.64■□□□□ 0.09
CLK3-209ENST00000562670 RASSF8Q8NHQ8 419 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 GJA10Q969M2 543 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 PNMA5Q96PV4 448 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 PLXNA1Q9UIW2 1896 aa15.64■□□□□ 0.09
CLK3-209ENST00000562670 KIAA1217Q5T5P2 1943 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 FSD2A1L4K1 749 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 HOXC6P09630 235 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 SFNP31947 248 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 JAK3P52333 1124 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 CRHR2Q13324 411 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 EPHA7Q15375 998 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 WDR78Q5VTH9 848 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 NCAPH2Q6IBW4 605 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 ZNF746Q6NUN9 644 aaPredicted RBP15.63■□□□□ 0.09
CLK3-209ENST00000562670 CNNM4Q6P4Q7 775 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 TRIML1Q8N9V2 468 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 PAGE5Q96GU1 130 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 HSD17B14Q9BPX1 270 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 SLC5A4Q9NY91 659 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 CPA4Q9UI42 421 aa15.63■□□□□ 0.09
CLK3-209ENST00000562670 ZNFX1Q9P2E3 1918 aaKnown RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 GTPBP6O43824 516 aaPredicted RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 SMC2O95347 1197 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 PGK2P07205 417 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 MAP2K2P36507 400 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 CCT6AP40227 531 aaKnown RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 TYRO3Q06418 890 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 STX1AQ16623 288 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 MORN1Q5T089 497 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 SASS6Q6UVJ0 657 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 SMAP1Q8IYB5 467 aaPredicted RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 GIMAP8Q8ND71 665 aaPredicted RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 SOCS4Q8WXH5 440 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
CLK3-209ENST00000562670 LRRC27Q9C0I9 530 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 UNC45AQ9H3U1 944 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 TSPY26PQ9H489 355 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 BLOC1S4Q9NUP1 217 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 SYNGAP1Q96PV0 1343 aa15.62■□□□□ 0.09
CLK3-209ENST00000562670 WDR64B1ANS9 1081 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 EML1O00423 815 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 COBLO75128 1261 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 AMPD3Q01432 767 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 DPYDQ12882 1025 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 PNOCQ13519 176 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 LRRC15Q8TF66 581 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 LARP4BQ92615 738 aaKnown RBP15.61■□□□□ 0.09
CLK3-209ENST00000562670 RAD54LQ92698 747 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 GSDMAQ96QA5 445 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 ZIC5Q96T25 663 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 MTRQ99707 1265 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 NUDT12Q9BQG2 462 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 PANK2Q9BZ23 570 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 VTA1Q9NP79 307 aa15.61■□□□□ 0.09
CLK3-209ENST00000562670 POTEB3A0JP26 581 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 ATP9AO75110 1047 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 MED24O75448 989 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 LYPLA2O95372 231 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 POTEBQ6S5H4 581 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 CATSPER3Q86XQ3 398 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms