RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 MCTP2Q6DN12 878 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 NECAB1Q8N987 351 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 KAT2BQ92831 832 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 SENP7Q9BQF6 1050 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 MXRA8Q9BRK3 442 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 HIPK3Q9H422 1215 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 JADE2Q9NQC1 790 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 STK36Q9NRP7 1315 aa18.41■□□□□ 0.54
COMMD4-206ENST00000562610 DTNBO60941 627 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 PPFIA4O75335 1185 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 LGALS2P05162 132 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 SUPT20HL2P0C7V6 817 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 HOXD8P13378 290 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-206ENST00000562610 KCNA2P16389 499 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 CYP2C18P33260 490 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 PTPN11Q06124 597 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-206ENST00000562610 ME3Q16798 604 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 C7orf31Q8N865 590 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 GTF3C6Q969F1 213 aa18.4■□□□□ 0.54
COMMD4-206ENST00000562610 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
COMMD4-206ENST00000562610 ATP9AO75110 1047 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 CYP2C9P11712 490 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
COMMD4-206ENST00000562610 CEP55Q53EZ4 464 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
COMMD4-206ENST00000562610 MFSD5Q6N075 450 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 TMEM199Q8N511 208 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 CYP2W1Q8TAV3 490 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 GPR20Q99678 358 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
COMMD4-206ENST00000562610 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 UMODL1Q5DID0 1318 aa18.39■□□□□ 0.53
COMMD4-206ENST00000562610 GBF1Q92538 1859 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 MAFGO15525 162 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 PTGISQ16647 500 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 TRIM50Q86XT4 487 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 SDF4Q9BRK5 362 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 C16orf70Q9BSU1 422 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-206ENST00000562610 HDAC6Q9UBN7 1215 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 ZNF215Q9UL58 517 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-206ENST00000562610 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 TELO2Q9Y4R8 837 aa18.38■□□□□ 0.53
COMMD4-206ENST00000562610 H3BRB1 525 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 HAS3O00219 553 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 ARP10275 920 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 CSF2RAP15509 400 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 XBP1P17861 261 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-206ENST00000562610 CCL23P55773 120 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 PPIGQ13427 754 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■■□ 25.8
COMMD4-206ENST00000562610 C9orf50Q5SZB4 431 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-206ENST00000562610 SESTD1Q86VW0 696 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
COMMD4-206ENST00000562610 TUT1Q9H6E5 874 aaKnown RBP18.37■□□□□ 0.53
COMMD4-206ENST00000562610 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-206ENST00000562610 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
COMMD4-206ENST00000562610 EPHB4P54760 987 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 SHHQ15465 462 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 CRYGNQ8WXF5 182 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 WASF1Q92558 559 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 WNT8AQ9H1J5 351 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 AGO4Q9HCK5 861 aaKnown RBP18.36■□□□□ 0.53
COMMD4-206ENST00000562610 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
COMMD4-206ENST00000562610 NFASCO94856 1347 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
COMMD4-206ENST00000562610 MEIS1O00470 390 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 SOX1O00570 391 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-206ENST00000562610 CYP3A4P08684 503 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 SETQ01105 290 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-206ENST00000562610 NIPA1Q7RTP0 329 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 FAM177A1Q8N128 213 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-206ENST00000562610 CCDC155Q8N6L0 562 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 DAGLBQ8NCG7 672 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 SCLYQ96I15 445 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
COMMD4-206ENST00000562610 KIF2CQ99661 725 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
COMMD4-206ENST00000562610 IGLV3-22A0A075B6J6 115 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 ITGB3BPQ13352 177 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-206ENST00000562610 PRR16Q569H4 304 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 GALNT17Q6IS24 598 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 NSUN7Q8NE18 718 aaKnown RBP18.34■□□□□ 0.53
COMMD4-206ENST00000562610 SEPT1Q8WYJ6 367 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 LRCH3Q96II8 777 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 UIMC1Q96RL1 719 aa18.34■□□□□ 0.53
COMMD4-206ENST00000562610 GJB4Q9NTQ9 266 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms