RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 POLR3CQ9BUI4 534 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 GTPBP4Q9BZE4 634 aaKnown RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 DNAJC25Q9H1X3 360 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 AGO4Q9HCK5 861 aaKnown RBP16.02■□□□□ 0.16
COMMD4-205ENST00000562310 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 ZNF236Q9UL36 1845 aa16.02■□□□□ 0.16
COMMD4-205ENST00000562310 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.15
COMMD4-205ENST00000562310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-205ENST00000562310 ZNF165P49910 485 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 ALDH5A1P51649 535 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-205ENST00000562310 INHBEP58166 350 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 CT47A1Q5JQC4 288 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-205ENST00000562310 SV2BQ7L1I2 683 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 OTOP1Q7RTM1 612 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 FAM43AQ8N2R8 423 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 RNF214Q8ND24 703 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
COMMD4-205ENST00000562310 RAD54LQ92698 747 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 GJA10Q969M2 543 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 TUFT1Q9NNX1 390 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
COMMD4-205ENST00000562310 BIN1O00499 593 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 FCER1AP12319 257 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 MORC3Q14149 939 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 STXBP2Q15833 593 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 DPCR1Q3MIW9 517 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
COMMD4-205ENST00000562310 MLKLQ8NB16 471 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 PLIN2Q99541 437 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 CBX8Q9HC52 389 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
COMMD4-205ENST00000562310 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 PEX10O60683 326 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
COMMD4-205ENST00000562310 XRCC6P12956 609 aaKnown RBP eCLIP15.99■□□□□ 0.15
COMMD4-205ENST00000562310 EDNRBP24530 442 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 KRT76Q01546 638 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 SREBF2Q12772 1141 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 KCNB1Q14721 858 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 EPHA7Q15375 998 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 Q3C1V9 767 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 ABRAQ8N0Z2 381 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 RDM1Q8NG50 284 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 PURBQ96QR8 312 aaKnown RBP15.99■□□□□ 0.15
COMMD4-205ENST00000562310 MTRQ99707 1265 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 NUDT12Q9BQG2 462 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
COMMD4-205ENST00000562310 UNC45AQ9H3U1 944 aa15.99■□□□□ 0.15
COMMD4-205ENST00000562310 NFASCO94856 1347 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 POTEB3A0JP26 581 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 TMEM88BA6NKF7 163 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 STRNO43815 780 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 MED24O75448 989 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 TOMM70O94826 608 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
COMMD4-205ENST00000562310 SFNP31947 248 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 ICAM3P32942 547 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 JAK3P52333 1124 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 CNTN2Q02246 1040 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 PDE4DQ08499 809 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 FSTL1Q12841 308 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 CUL4BQ13620 913 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 WDR78Q5VTH9 848 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 POTEBQ6S5H4 581 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 ANKRD13CQ8N6S4 541 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 UIMC1Q96RL1 719 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 PTPN18Q99952 460 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 TRIM9Q9C026 710 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 ABT1Q9ULW3 272 aaKnown RBP15.98■□□□□ 0.15
COMMD4-205ENST00000562310 KIAA1024Q9UPX6 916 aa15.98■□□□□ 0.15
COMMD4-205ENST00000562310 ADGRA2Q96PE1 1338 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 SOWAHBA6NEL2 793 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 BECN2A8MW95 431 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 GOLGA6L19H0YKK7 550 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 EML1O00423 815 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 DHX15O43143 795 aaKnown RBP15.97■□□□□ 0.15
COMMD4-205ENST00000562310 CHMP2AO43633 222 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 SPATA31C1P0DKV0 1188 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 MAPK4P31152 587 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 TPM4P67936 248 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 ITGB3BPQ13352 177 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-205ENST00000562310 ZNF746Q6NUN9 644 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-205ENST00000562310 MIER3Q7Z3K6 550 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 CATSPER3Q86XQ3 398 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 LRRC15Q8TF66 581 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 STAMQ92783 540 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 ZFP91Q96JP5 570 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-205ENST00000562310 HSD17B14Q9BPX1 270 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 BLZF1Q9H2G9 400 aa15.97■□□□□ 0.15
COMMD4-205ENST00000562310 BMP2KQ9NSY1 1161 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-205ENST00000562310 DNM3Q9UQ16 869 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms