RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 STAM2O75886 525 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SMIM10L2AP0DMW4 78 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SMIM10L2BP0DMW5 78 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 THPOP40225 353 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 GNPTABQ3T906 1256 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 GDPD5Q8WTR4 605 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RAD9AQ99638 391 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SPZ1Q9BXG8 430 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RTEL1Q9NZ71 1219 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 TELO2Q9Y4R8 837 aa19.29■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 EMSYQ7Z589 1322 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 TCF20Q9UGU0 1960 aaKnown RBP19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RSPH10B2B2RC85 870 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 TREHO43280 583 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 EFCAB14O75071 495 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RSPH10BP0C881 870 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 USP17L6PQ6QN14 398 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 METTL7BQ6UX53 244 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 CYFIP1Q7L576 1253 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 GPR20Q99678 358 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RNPEPQ9H4A4 650 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MTUS1Q9ULD2 1270 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SIP14410 1827 aa19.28■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MICAL3Q7RTP6 2002 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 LINC01553A4QN01 128 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 NOP56O00567 594 aaKnown RBP19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 MEIS2O14770 477 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 FIBPO43427 364 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 DDAH1O94760 285 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 NEDD9Q14511 834 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 AAK1Q2M2I8 961 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 FAM117BQ6P1L5 589 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 TRIM50Q86XT4 487 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 DBF4BQ8NFT6 615 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 OSBPL7Q9BZF2 842 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 SUGCTQ9HAC7 445 aa19.27■□□□□ 0.68
VPS9D1-AS1-201ENST00000562298 PIK3CDO00329 1044 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 PRC1O43663 620 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 PLEKHA8P1O95397 391 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 ERVK-21P61565 698 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 PLEKHG4Q58EX7 1191 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SMARCC2Q8TAQ2 1214 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 USP26Q9BXU7 913 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 COG5Q9UP83 839 aa19.26■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 KIF5BP33176 963 aa19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CASC1Q6TDU7 716 aa19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SRBD1Q8N5C6 995 aaKnown RBP19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 TGS1Q96RS0 853 aaKnown RBP19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 LSG1Q9H089 658 aaKnown RBP19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SETD4Q9NVD3 440 aa19.25■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CTSHP09668 335 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 RXRAP19793 462 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 MYOCDQ8IZQ8 938 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CUL5Q93034 780 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 HLA-CQ95604 372 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SENP7Q9BQF6 1050 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 LMCD1Q9NZU5 365 aa19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SEC63Q9UGP8 760 aaKnown RBP19.24■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CAND2O75155 1236 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 AMHP03971 560 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 COL9A1P20849 921 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 MCM5P33992 734 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 ADAM17P78536 824 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 HTRA4P83105 476 aaPredicted RBP19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SP4Q02446 784 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 UTP14CQ5TAP6 766 aaKnown RBP19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 XRRA1Q6P2D8 792 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 NFXL1Q6ZNB6 911 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 LZTS2Q9BRK4 669 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 C17orf80Q9BSJ5 609 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 INSL6Q9Y581 213 aa19.23■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 CCDC69A6NI79 296 aa19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SLC27A2O14975 620 aa19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 ATP9AO75110 1047 aa19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SP7Q8TDD2 431 aaPredicted RBP19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 TMEM87BQ96K49 555 aa19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 GNAT1P11488 350 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 KCNA2P16389 499 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 ITGB5P18084 799 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 LIFRP42702 1097 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 GNAQP50148 359 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 NECTIN1Q15223 517 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 NLRX1Q86UT6 975 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 TMTC2Q8N394 836 aa19.21■□□□□ 0.67
VPS9D1-AS1-201ENST00000562298 SEPT8Q92599 483 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms