RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MARCKSP29966 332 aaPredicted RBP25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 ORC2Q13416 577 aaPredicted RBP25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 GPT2Q8TD30 523 aa25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 DDX41Q9UJV9 622 aaKnown RBP25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 PCDHA7Q9UN72 937 aa25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 UBIAD1Q9Y5Z9 338 aa25.41■■□□□ 1.66
SYNGR3-202ENST00000562045 SORBS3O60504 671 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 MCM7P33993 719 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 LETM2Q2VYF4 491 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 ADALQ6DHV7 355 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 TLK2Q86UE8 772 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 EHMT1Q9H9B1 1298 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 MRVI1Q9Y6F6 885 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 FAM86B1E9PN63 330 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 DYNC1LI2O43237 492 aaPredicted RBP25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 FAM86B2P0C5J1 330 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 TTLL4Q14679 1199 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 LRRC41Q15345 812 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 XRRA1Q6P2D8 792 aa25.4■■□□□ 1.66
SYNGR3-202ENST00000562045 ATP2C1P98194 919 aaPredicted RBP25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 BEX3Q00994 111 aa25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 TPRNQ4KMQ1 711 aa25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 KRI1Q8N9T8 703 aaKnown RBP25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 NAP1L4Q99733 375 aaKnown RBP25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 UPF3AQ9H1J1 476 aaKnown RBP25.39■■□□□ 1.65
SYNGR3-202ENST00000562045 SPATA31C2B4DYI2 1134 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 CCNT1O60563 726 aaKnown RBP25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 STAM2O75886 525 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 CYP3A4P08684 503 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 GJA9P57773 515 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 PTGDRQ13258 359 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 MXRA8Q9BRK3 442 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 TELO2Q9Y4R8 837 aa25.38■■□□□ 1.65
SYNGR3-202ENST00000562045 A0A1W2PQ27 194 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 A0A1W2PQ64 194 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 A0A1W2PQD8 194 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 ATP9AO75110 1047 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 UBA1P22314 1058 aaKnown RBP25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 ICAM3P32942 547 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 UBE2Q1Q7Z7E8 422 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 UIMC1Q96RL1 719 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 JADE2Q9NQC1 790 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 IGLV3-22A0A075B6J6 115 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 LAD1O00515 517 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 CUTAO60888 179 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 C6orf222P0C671 652 aaPredicted RBP25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 ARP10275 920 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 ARHGAP1Q07960 439 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 AXDND1Q5T1B0 1012 aaPredicted RBP25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 CCSAPQ6IQ19 270 aaPredicted RBP25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 KLHDC9Q8NEP7 349 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 PKD2L1Q9P0L9 805 aa25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 SRPRBQ9Y5M8 271 aaKnown RBP25.37■■□□□ 1.65
SYNGR3-202ENST00000562045 GCFC2P16383 781 aaKnown RBP25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 USP11P51784 963 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 GNPTABQ3T906 1256 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 CEP55Q53EZ4 464 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 PPP4R3AQ6IN85 833 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 OR6J1Q8NGC5 347 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 FERMT2Q96AC1 680 aa25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 PAWRQ96IZ0 340 aaKnown RBP25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 FBXO2Q9UK22 296 aaPredicted RBP25.36■■□□□ 1.65
SYNGR3-202ENST00000562045 MEIS1O00470 390 aa25.35■■□□□ 1.65
SYNGR3-202ENST00000562045 MTMR1Q13613 665 aa25.35■■□□□ 1.65
SYNGR3-202ENST00000562045 ARL6IP4Q66PJ3 421 aaKnown RBP25.35■■□□□ 1.65
SYNGR3-202ENST00000562045 GPRASP2Q96D09 838 aa25.35■■□□□ 1.65
SYNGR3-202ENST00000562045 NEMFO60524 1076 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 TDP2O95551 362 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 ZNF76P36508 570 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 NKX3-2P78367 333 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 NLRX1Q86UT6 975 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 LENG9Q96B70 501 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 KCNH7Q9NS40 1196 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 Q9Y3F1 56 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 DNM1LO00429 736 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 FARP2O94887 1054 aaPredicted RBP25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 GGPS1O95749 300 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 KCNA2P16389 499 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 CIITAP33076 1130 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 KCNA10Q16322 511 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 MOXD1Q6UVY6 613 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 C4orf32Q8N8J7 132 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 ARRDC4Q8NCT1 418 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 MRPS27Q92552 414 aaKnown RBP25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 AP5M1Q9H0R1 490 aa25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 TNRC18O15417 2968 aaPredicted RBP25.34■■□□□ 1.65
SYNGR3-202ENST00000562045 NKRFO15226 690 aaKnown RBP eCLIP25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 GH1P01241 217 aa25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 TGFB3P10600 412 aa25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 FSCN1Q16658 493 aaKnown RBP25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 GNASQ5JWF2 1037 aa25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 CELF3Q5SZQ8 465 aaKnown RBP25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 RNF180Q86T96 592 aa25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 ZNF579Q8NAF0 562 aaKnown RBP25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 ANKLE1Q8NAG6 615 aa25.33■■□□□ 1.65
SYNGR3-202ENST00000562045 CMA1P23946 247 aa25.32■■□□□ 1.64
SYNGR3-202ENST00000562045 CST5P28325 142 aaPredicted RBP25.32■■□□□ 1.64
SYNGR3-202ENST00000562045 PRPHP41219 470 aa25.32■■□□□ 1.64
SYNGR3-202ENST00000562045 PRR16Q569H4 304 aa25.32■■□□□ 1.64
SYNGR3-202ENST00000562045 CAVIN1Q6NZI2 390 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms