RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TELO2Q9Y4R8 837 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 PCDHB4Q9Y5E5 795 aa3.68□□□□□ -1.82
CHD9-204ENST00000561869 NKRFO15226 690 aaKnown RBP eCLIP3.67□□□□□ -1.821e-8■□□□□ 9.7
CHD9-204ENST00000561869 SOD2P04179 222 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 COL6A2P12110 1019 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 GRK2P25098 689 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 GRK3P35626 688 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 SARSP49591 514 aaKnown RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 RTP5Q14D33 572 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 KIZQ2M2Z5 673 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 TEPPQ6URK8 271 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 FRMD5Q7Z6J6 570 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 PRRT2Q7Z6L0 340 aaPredicted RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 ZC3H18Q86VM9 953 aaKnown RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 ZNF761Q86XN6 746 aaPredicted RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 PROSER1Q86XN7 944 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 RBM12BQ8IXT5 1001 aaKnown RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 TTLL6Q8N841 843 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 TTLL11Q8NHH1 800 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 TOE1Q96GM8 510 aaKnown RBP3.67□□□□□ -1.82
CHD9-204ENST00000561869 DNAJC7Q99615 494 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 IPPKQ9H8X2 491 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 KDM2BQ8NHM5 1336 aa3.67□□□□□ -1.82
CHD9-204ENST00000561869 TCRBV5S4A2TA0A5A2 114 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 KRIT1O00522 736 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 WNT9AO14904 365 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 SLC27A2O14975 620 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 LTFP02788 710 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 RPL13P26373 211 aaKnown RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 EPHA5P54756 1037 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 SUMO1P63165 101 aaKnown RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 NKX3-2P78367 333 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 SF3A1Q15459 793 aaKnown RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 ZFYVE27Q5T4F4 411 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 NT5DC1Q5TFE4 455 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 MAMDC2Q7Z304 686 aaPredicted RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 PCDH19Q8TAB3 1148 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 UHMK1Q8TAS1 419 aaKnown RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 ADAMTS17Q8TE56 1095 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 SH3RF2Q8TEC5 729 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 PTPRN2Q92932 1015 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 KCNJ15Q99712 375 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 CDC6Q99741 560 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 DHRS4Q9BTZ2 278 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 NGRNQ9NPE2 291 aaKnown RBP3.66□□□□□ -1.82
CHD9-204ENST00000561869 NTMQ9P121 344 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 RBPJLQ9UBG7 517 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 PCDHA8Q9Y5H6 950 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 DUSP10Q9Y6W6 482 aa3.66□□□□□ -1.82
CHD9-204ENST00000561869 FAM47E-STBD1D6RA91 191 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 ACOT7O00154 380 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 ARVCFO00192 962 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 PRICKLE3O43900 615 aaPredicted RBP3.65□□□□□ -1.83
CHD9-204ENST00000561869 SMARCA5O60264 1052 aaPredicted RBP3.65□□□□□ -1.83
CHD9-204ENST00000561869 MAFKO60675 156 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 SPIRE1Q08AE8 756 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 TUSC3Q13454 348 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 SOGA3Q5TF21 947 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 TTLL7Q6ZT98 887 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 DPH6Q7L8W6 267 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 TRIM48Q8IWZ4 208 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 LILRB2Q8N423 598 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 PMFBP1Q8TBY8 1022 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 SREK1Q8WXA9 508 aaKnown RBP3.65□□□□□ -1.83
CHD9-204ENST00000561869 TEPSINQ96N21 525 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 LNPKQ9C0E8 428 aa3.65□□□□□ -1.83
CHD9-204ENST00000561869 MRPS23Q9Y3D9 190 aaKnown RBP3.65□□□□□ -1.83
CHD9-204ENST00000561869 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 DDX3XO00571 662 aaKnown RBP eCLIP3.64□□□□□ -1.83
CHD9-204ENST00000561869 AQP7O14520 342 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 AMY2AP04746 511 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 CELA3BP08861 270 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 GNAT1P11488 350 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 FAHP16930 419 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 ZNF28P17035 718 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 AMY2BP19961 511 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 MLLT6P55198 1093 aaPredicted RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 GABREP78334 506 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 GRIN1Q05586 938 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 PAK1Q13153 545 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 PAN2Q504Q3 1202 aaKnown RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 TRIM61Q5EBN2 209 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 ZC3H12BQ5HYM0 836 aaKnown RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 FAM26FQ5R3K3 315 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 DBX2Q6ZNG2 339 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 GSTCDQ8NEC7 633 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 SRPK1Q96SB4 655 aaKnown RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 DNAJC2Q99543 621 aaKnown RBP3.64□□□□□ -1.83
CHD9-204ENST00000561869 YIPF4Q9BSR8 244 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 ALG1Q9BT22 464 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 SLC52A2Q9HAB3 445 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 DSEQ9UL01 958 aa3.64□□□□□ -1.83
CHD9-204ENST00000561869 CRTAMO95727 393 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 COL6A1P12109 1028 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 IL13P35225 146 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 TMC5Q6UXY8 1006 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 KCTD1Q719H9 257 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 C16orf59Q7L2K0 433 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 FERMT3Q86UX7 667 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 DTX3Q8N9I9 347 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms