RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 HDAC6Q9UBN7 1215 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 EIF5BO60841 1220 aaKnown RBP27.26■■□□□ 1.95
CDR2-202ENST00000561630 KCNA2P16389 499 aa27.26■■□□□ 1.95
CDR2-202ENST00000561630 MTMR1Q13613 665 aa27.26■■□□□ 1.95
CDR2-202ENST00000561630 ZNF365Q70YC5 407 aa27.26■■□□□ 1.95
CDR2-202ENST00000561630 DEFB123Q8N688 67 aa27.26■■□□□ 1.95
CDR2-202ENST00000561630 CCDC12Q8WUD4 166 aaPredicted RBP27.26■■□□□ 1.95
CDR2-202ENST00000561630 ZMYND12Q9H0C1 365 aa27.26■■□□□ 1.95
CDR2-202ENST00000561630 ATP9AO75110 1047 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 LGALS2P05162 132 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 BFSP2Q13515 415 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 RASIP1Q5U651 963 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 FAM109BQ6ICB4 259 aaPredicted RBP27.25■■□□□ 1.95
CDR2-202ENST00000561630 SCLYQ96I15 445 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 PGBD1Q96JS3 809 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 LARP6Q9BRS8 491 aaKnown RBP27.25■■□□□ 1.95
CDR2-202ENST00000561630 SLC26A6Q9BXS9 759 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 TMEM260Q9NX78 707 aa27.25■■□□□ 1.95
CDR2-202ENST00000561630 H3BRB1 525 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 PPFIA3O75145 1194 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 SREBF1P36956 1147 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 Q7L0L9 218 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 RPUSD2Q8IZ73 545 aaKnown RBP27.24■■□□□ 1.95
CDR2-202ENST00000561630 VWCEQ96DN2 955 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 MXRA8Q9BRK3 442 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 TUT1Q9H6E5 874 aaKnown RBP27.24■■□□□ 1.95
CDR2-202ENST00000561630 C6orf50Q9HD87 102 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 TELO2Q9Y4R8 837 aa27.24■■□□□ 1.95
CDR2-202ENST00000561630 FGBP02675 491 aa27.23■■□□□ 1.95
CDR2-202ENST00000561630 RETREG2Q8NC44 543 aa27.23■■□□□ 1.95
CDR2-202ENST00000561630 CAGE1Q8TC20 777 aa27.23■■□□□ 1.95
CDR2-202ENST00000561630 HERVK_113Q902F9 699 aa27.23■■□□□ 1.95
CDR2-202ENST00000561630 IL17RAQ96F46 866 aa27.23■■□□□ 1.95
CDR2-202ENST00000561630 SP4Q02446 784 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 CEP55Q53EZ4 464 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 JAKMIP3Q5VZ66 844 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 CCDC155Q8N6L0 562 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 CYP2W1Q8TAV3 490 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 KCNH7Q9NS40 1196 aa27.22■■□□□ 1.95
CDR2-202ENST00000561630 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.21■■□□□ 1.95
CDR2-202ENST00000561630 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.21■■□□□ 1.95
CDR2-202ENST00000561630 PFKMP08237 780 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 IQCF3P0C7M6 154 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 GNA11P29992 359 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 RFC2P35250 354 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 MCTP2Q6DN12 878 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 TRIM22Q8IYM9 498 aa27.21■■□□□ 1.95
CDR2-202ENST00000561630 DHX38Q92620 1227 aaKnown RBP27.21■■□□□ 1.95
CDR2-202ENST00000561630 CPLX1O14810 134 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 ADAMTS3O15072 1205 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 ARHGAP4P98171 946 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 RBL2Q08999 1139 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 PTK7Q13308 1070 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 REXO1Q8N1G1 1221 aaKnown RBP27.2■■□□□ 1.94
CDR2-202ENST00000561630 CCDC148Q8NFR7 591 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 AFAP1L1Q8TED9 768 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 SH3GLB2Q9NR46 395 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 MTMR10Q9NXD2 777 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 PKD2L1Q9P0L9 805 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 MYH7BA7E2Y1 1941 aa27.2■■□□□ 1.94
CDR2-202ENST00000561630 MEIS1O00470 390 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 HOXC8P31273 242 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 ZNF200P98182 395 aaPredicted RBP27.19■■□□□ 1.94
CDR2-202ENST00000561630 SSRP1Q08945 709 aaKnown RBP27.19■■□□□ 1.94
CDR2-202ENST00000561630 STK3Q13188 491 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 HIC1Q14526 733 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 TRIM50Q86XT4 487 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 BICD2Q8TD16 824 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 CRYGNQ8WXF5 182 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 SEPT1Q8WYJ6 367 aa27.19■■□□□ 1.94
CDR2-202ENST00000561630 MTIF3Q9H2K0 278 aaKnown RBP27.19■■□□□ 1.94
CDR2-202ENST00000561630 CXXC1Q9P0U4 656 aaPredicted RBP27.19■■□□□ 1.94
CDR2-202ENST00000561630 ZNF215Q9UL58 517 aaPredicted RBP27.19■■□□□ 1.94
CDR2-202ENST00000561630 SMIM10L2AP0DMW4 78 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 SMIM10L2BP0DMW5 78 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 TCF7P36402 384 aaPredicted RBP27.18■■□□□ 1.94
CDR2-202ENST00000561630 UTP14CQ5TAP6 766 aaKnown RBP27.18■■□□□ 1.94
CDR2-202ENST00000561630 CPLX2Q6PUV4 134 aaKnown RBP27.18■■□□□ 1.94
CDR2-202ENST00000561630 NIPA1Q7RTP0 329 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 OTOP2Q7RTS6 562 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 DEFB128Q7Z7B8 93 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 VPS54Q9P1Q0 977 aa27.18■■□□□ 1.94
CDR2-202ENST00000561630 GSTTP1A0A1W2PQM5 241 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 C17orf102A2RUQ5 167 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 SEC24BO95487 1268 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 CYP3A4P08684 503 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 ARP10275 920 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 SELPP16109 830 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 ZNF697Q5TEC3 545 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 JPH1Q9HDC5 661 aaPredicted RBP27.17■■□□□ 1.94
CDR2-202ENST00000561630 TPCN1Q9ULQ1 816 aa27.17■■□□□ 1.94
CDR2-202ENST00000561630 NFASCO94856 1347 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 DEXIO95424 95 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 CKBP12277 381 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 ZNF76P36508 570 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 ANKRD1Q15327 319 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 TRIM71Q2Q1W2 868 aaKnown RBP27.16■■□□□ 1.94
CDR2-202ENST00000561630 SERINC5Q86VE9 423 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 RNPEPQ9H4A4 650 aa27.16■■□□□ 1.94
CDR2-202ENST00000561630 AGO4Q9HCK5 861 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms