RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 BIVM-ERCC5R4GMW8 1640 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 PBRM1Q86U86 1689 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 B4E1Z4 1266 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 C22orf46C9J442 243 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 N4BP3O15049 544 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 SRGAP3O43295 1099 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 BUB1BO60566 1050 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 MSCO60682 206 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 RAPGEF3O95398 923 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CAPNS1P04632 268 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 ZSCAN22P10073 491 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 ATF2P15336 505 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CNGA1P29973 690 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 SOX5P35711 763 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CORO7P57737 925 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 IGBP1P78318 339 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CBX2Q14781 532 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 DALRD3Q5D0E6 543 aaKnown RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 KCNT2Q6UVM3 1135 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 RSPO2Q6UXX9 243 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 SPOCD1Q6ZMY3 1216 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 ADGRG2Q8IZP9 1017 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 BHLHE22Q8NFJ8 381 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 DIO2Q92813 273 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CHAMP1Q96JM3 812 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 MAGEB10Q96LZ2 347 aaPredicted RBP5.19□□□□□ -1.58
HERC1-215ENST00000561436 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 MMP19Q99542 508 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 IFT57Q9NWB7 429 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 IRAK3Q9Y616 596 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 CD109Q6YHK3 1445 aa5.19□□□□□ -1.58
HERC1-215ENST00000561436 IRS4O14654 1257 aaPredicted RBP5.18□□□□□ -1.58
HERC1-215ENST00000561436 MYCLP1P12525 358 aaPredicted RBP5.18□□□□□ -1.58
HERC1-215ENST00000561436 FBLN1P23142 703 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 PMLP29590 882 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 LTBRP36941 435 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 NR1I3Q14994 352 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 TRIM61Q5EBN2 209 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 CIAPIN1Q6FI81 312 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 CEP68Q76N32 757 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 MTDHQ86UE4 582 aaKnown RBP5.18□□□□□ -1.58
HERC1-215ENST00000561436 DHX37Q8IY37 1157 aaKnown RBP5.18□□□□□ -1.58
HERC1-215ENST00000561436 AHI1Q8N157 1196 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 NLGN2Q8NFZ4 835 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 CHAC2Q8WUX2 184 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 ALG3Q92685 438 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 SIGLEC10Q96LC7 697 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 ALG1Q9BT22 464 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 COL4A3BPQ9Y5P4 624 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 WDR7Q9Y4E6 1490 aa5.18□□□□□ -1.58
HERC1-215ENST00000561436 HRKO00198 91 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 ABLIM1O14639 778 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 OPA1O60313 960 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 ASGR2P07307 311 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 CPEP16870 476 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 MASP1P48740 699 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 GTF2A2P52657 109 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
HERC1-215ENST00000561436 NTRK3Q16288 839 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 C21orf62-AS1Q17RA5 79 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 TM4SF20Q53R12 229 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 STYK1Q6J9G0 422 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 CABP7Q86V35 215 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 IFNL3Q8IZI9 196 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 PPM1KQ8N3J5 372 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 FAM26EQ8N5C1 309 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.17□□□□□ -1.58
HERC1-215ENST00000561436 PHF20Q9BVI0 1012 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 GPR27Q9NS67 375 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 NOP58Q9Y2X3 529 aaKnown RBP5.17□□□□□ -1.58
HERC1-215ENST00000561436 TIMM13Q9Y5L4 95 aaPredicted RBP5.17□□□□□ -1.58
HERC1-215ENST00000561436 GOLGA3Q08378 1498 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 UGGT2Q9NYU1 1516 aa5.17□□□□□ -1.58
HERC1-215ENST00000561436 RAPGEF2Q9Y4G8 1499 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 A0A1B0GTL3 188 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 SGSM2O43147 1006 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 KCNQ2O43526 872 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 PLA2G1BP04054 148 aaKnown RBP5.16□□□□□ -1.58
HERC1-215ENST00000561436 ASLP04424 464 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 IGFALSP35858 605 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 GPR85P60893 370 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 TESK1Q15569 626 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 OLFML2BQ68BL8 750 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 CNKSR3Q6P9H4 555 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 UBE2R2Q712K3 238 aaPredicted RBP5.16□□□□□ -1.58
HERC1-215ENST00000561436 BRAPQ7Z569 592 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 STK32CQ86UX6 486 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 FAM129CQ86XR2 697 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
HERC1-215ENST00000561436 NOX5Q96PH1 765 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 JAM3Q9BX67 310 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 CAAP1Q9H8G2 361 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 SLC52A2Q9HAB3 445 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 CLDND1Q9NY35 253 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.16□□□□□ -1.58
HERC1-215ENST00000561436 MAPRE3Q9UPY8 281 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 ARAP3Q8WWN8 1544 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms