RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 IL13P35225 146 aa7.65□□□□□ -1.18
HMBOX1-216ENST00000561377 ST13P5Q8NFI4 369 aaPredicted RBP7.65□□□□□ -1.18
HMBOX1-216ENST00000561377 TTLL11Q8NHH1 800 aa7.65□□□□□ -1.18
HMBOX1-216ENST00000561377 YTHDC1Q96MU7 727 aaKnown RBP7.65□□□□□ -1.18
HMBOX1-216ENST00000561377 JAM3Q9BX67 310 aa7.65□□□□□ -1.18
HMBOX1-216ENST00000561377 MSCO60682 206 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 FGFR1P11362 822 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 INSRRP14616 1297 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 GLB1LQ6UWU2 654 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 PIP4K2CQ8TBX8 421 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 LOXL4Q96JB6 756 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 ZFYVE21Q9BQ24 234 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 PPARGC1AQ9UBK2 798 aaKnown RBP7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 FTSJ1Q9UET6 329 aa7.64□□□□□ -1.19
HMBOX1-216ENST00000561377 SLC27A2O14975 620 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 PRODHO43272 600 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 LAMTOR5O43504 91 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 GRK2P25098 689 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 GRK3P35626 688 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 MLLT6P55198 1093 aaPredicted RBP7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 KIZQ2M2Z5 673 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 TMC5Q6UXY8 1006 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 OTOP3Q7RTS5 596 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 LRRC47Q8N1G4 583 aaKnown RBP7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
HMBOX1-216ENST00000561377 TRAV20A0A0B4J274 112 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 SPIRE1Q08AE8 756 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 PUM1Q14671 1186 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 CPZQ66K79 652 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 VASNQ6EMK4 673 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 NSMFQ6X4W1 530 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 LBX2Q6XYB7 198 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 DPH6Q7L8W6 267 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 CHST13Q8NET6 341 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 ARHGEF4Q9NR80 690 aa7.62□□□□□ -1.19
HMBOX1-216ENST00000561377 B4GALT3O60512 393 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 GNAT1P11488 350 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 PABPC1P11940 636 aaKnown RBP7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 IFRD2Q12894 506 aaPredicted RBP7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 RAB33AQ14088 237 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 TRMT10BQ6PF06 316 aaKnown RBP7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 KLHL36Q8N4N3 616 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 DLL4Q9NR61 685 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 WASF3Q9UPY6 502 aa7.61□□□□□ -1.19
HMBOX1-216ENST00000561377 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 GPR85P60893 370 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 GRIN1Q05586 938 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 PKN3Q6P5Z2 889 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 KCNT2Q6UVM3 1135 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 IFNL3Q8IZI9 196 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 UHMK1Q8TAS1 419 aaKnown RBP7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 OSBP2Q969R2 916 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 ZNF669Q96BR6 464 aaPredicted RBP7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 MBD6Q96DN6 1003 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 C1QTNF3Q9BXJ4 246 aa7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 BARX1Q9HBU1 254 aaPredicted RBP7.6□□□□□ -1.19
HMBOX1-216ENST00000561377 TUSC3Q13454 348 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 NTRK3Q16288 839 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 PROSER1Q86XN7 944 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 DTX3Q8N9I9 347 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 KCNJ15Q99712 375 aa7.59□□□□□ -1.19
HMBOX1-216ENST00000561377 FAM47E-STBD1D6RA91 191 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 STK10O94804 968 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 COL6A2P12110 1019 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 FAHP16930 419 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 ZNF20P17024 532 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 NFATC3Q12968 1075 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 PAN2Q504Q3 1202 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 ARHGEF18Q6ZSZ5 1173 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 LIMS2Q7Z4I7 341 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 KBTBD2Q8IY47 623 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 ALG1Q9BT22 464 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 PDGFDQ9GZP0 370 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 PPP4R1LQ9P1A2 415 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 RBPJLQ9UBG7 517 aa7.58□□□□□ -1.2
HMBOX1-216ENST00000561377 NPEPPSL1A6NEC2 478 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 C1QTNF3-AMACRE9PGA6 284 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 SOD2P04179 222 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 CHGBP05060 677 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 PPP2CBP62714 309 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 PPP2CAP67775 309 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 SMAD2Q15796 467 aaKnown RBP7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 HABP4Q5JVS0 413 aaKnown RBP7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 CKAP2LQ8IYA6 745 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 DVL3Q92997 716 aaPredicted RBP7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 TMPRSS5Q9H3S3 457 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 DSEQ9UL01 958 aa7.57□□□□□ -1.2
HMBOX1-216ENST00000561377 FBXO21O94952 628 aa7.56□□□□□ -1.2
HMBOX1-216ENST00000561377 EPHB4P54760 987 aa7.56□□□□□ -1.2
HMBOX1-216ENST00000561377 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.56□□□□□ -1.2
HMBOX1-216ENST00000561377 RBM12BQ8IXT5 1001 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms