RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MEIS1O00470 390 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 NEMFO60524 1076 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 SFNP31947 248 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 MCM7P33993 719 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 JAK3P52333 1124 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 NR5A1Q13285 461 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 ORC2Q13416 577 aaPredicted RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 PPP4R3AQ6IN85 833 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 SMAP1Q8IYB5 467 aaPredicted RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 RIT2Q99578 217 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 NRBP2Q9NSY0 501 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
TPM1-229ENST00000561242 NFASCO94856 1347 aa12.1□□□□□ -0.47
TPM1-229ENST00000561242 WDR64B1ANS9 1081 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 TBX3O15119 743 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 CHMP2AO43633 222 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 DTNBO60941 627 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 ITGB5P18084 799 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 CIITAP33076 1130 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 Q4G0T1 1027 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 CCDC62Q6P9F0 684 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 CXCL17Q6UXB2 119 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 COPS5Q92905 334 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
TPM1-229ENST00000561242 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
TPM1-229ENST00000561242 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
TPM1-229ENST00000561242 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 FRMPD4Q14CM0 1322 aa12.09□□□□□ -0.47
TPM1-229ENST00000561242 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
TPM1-229ENST00000561242 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 A6NJR5 290 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 LAD1O00515 517 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 STX6O43752 255 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
TPM1-229ENST00000561242 MMP3P08254 477 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 ARP10275 920 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 SLC26A2P50443 739 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 STAT5BP51692 787 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 ITGA7Q13683 1181 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 ZNF174Q15697 407 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
TPM1-229ENST00000561242 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 ASTN1O14525 1302 aa12.08□□□□□ -0.48
TPM1-229ENST00000561242 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 A0A0G2JMZ2 1700 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 H3BRB1 525 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 M0QZ92 97 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
TPM1-229ENST00000561242 ADAMTS4O75173 837 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 CYP3A7P24462 503 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
TPM1-229ENST00000561242 TXKP42681 527 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 PSEN2P49810 448 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 ACTR2P61160 394 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
TPM1-229ENST00000561242 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 MFSD10Q14728 455 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 NCAPH2Q6IBW4 605 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 FAM167AQ96KS9 214 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 TUT1Q9H6E5 874 aaKnown RBP12.07□□□□□ -0.48
TPM1-229ENST00000561242 ZNF302Q9NR11 478 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
TPM1-229ENST00000561242 C17orf102A2RUQ5 167 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 RRN3P2A6NIE6 340 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 ARVCFO00192 962 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 ARIH2O95376 493 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 TDP2O95551 362 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms