RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RLFQ13129 1914 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 SPDYE5A6NIY4 337 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 IPO5O00410 1097 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 CXCL11O14625 94 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 GAS7O60861 476 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 FCER1AP12319 257 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 CYP11B2P19099 503 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 CCNE1P24864 410 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 NR1I3Q14994 352 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 TPD52L1Q16890 204 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 HSP90AA4PQ58FG1 418 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 FOXR2Q6PJQ5 311 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 DYMQ7RTS9 669 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 SYT2Q8N9I0 419 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 PROCA1Q8NCQ7 364 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 IL31RAQ8NI17 732 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 NOC3LQ8WTT2 800 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 PDCD2LQ9BRP1 358 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 JADE2Q9NQC1 790 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 PARP14Q460N5 1801 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 SMCHD1A6NHR9 2005 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 A0A0G2JLL6 359 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 BICDL2A1A5D9 508 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 FRMD3A2A2Y4 597 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 PMS1P54277 932 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 LRMPQ12912 555 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 PGM5Q15124 567 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 EPHA7Q15375 998 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 PNMA8AQ86V59 439 aaPredicted RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 GUF1Q8N442 669 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 CCDC150Q8NCX0 1101 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 P2RX5Q93086 422 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 THAP9Q9H5L6 903 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 KCNH7Q9NS40 1196 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 ADD3Q9UEY8 706 aaKnown RBP14.4□□□□□ -0.1
SNX1-211ENST00000560829 PYCARDQ9ULZ3 195 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 KCNH4Q9UQ05 1017 aa14.4□□□□□ -0.1
SNX1-211ENST00000560829 SLITRK3O94933 977 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 BAATQ14032 418 aaPredicted RBP14.39□□□□□ -0.11
SNX1-211ENST00000560829 TREML2Q5T2D2 321 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 CENPPQ6IPU0 288 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 LBX2Q6XYB7 198 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 MB21D1Q8N884 522 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 ACAD9Q9H845 621 aa14.39□□□□□ -0.11
SNX1-211ENST00000560829 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 IRF6O14896 467 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 DHX15O43143 795 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 EYA4O95677 639 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 IDEP14735 1019 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 PSMC6P62333 389 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 COASYQ13057 564 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 PPIL2Q13356 520 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 IRF2BP1Q8IU81 584 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 CCDC65Q8IXS2 484 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 DUSP9Q99956 384 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 AGO4Q9HCK5 861 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 SSBP05455 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX1-211ENST00000560829 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 PBX1P40424 430 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 ARID5BQ14865 1188 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 HPS3Q969F9 1004 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
SNX1-211ENST00000560829 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 CYP39A1Q9NYL5 469 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 RGL1Q9NZL6 768 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 PCDHA2Q9Y5H9 948 aa14.38□□□□□ -0.11
SNX1-211ENST00000560829 WDR90Q96KV7 1748 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 KCNJ18B7U540 433 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 COBLO75128 1261 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 CCZ1BP86790 482 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 CCZ1P86791 482 aaPredicted RBP14.37□□□□□ -0.11
SNX1-211ENST00000560829 CYP4A11Q02928 519 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 MTMR1Q13613 665 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 KCNJ12Q14500 433 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 KRT31Q15323 416 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 FILIP1LQ4L180 1135 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 FAM26FQ5R3K3 315 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 ARHGEF16Q5VV41 709 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
SNX1-211ENST00000560829 ARMC9Q7Z3E5 817 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms