RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 POTEMA6NI47 508 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 HLA-DOAP06340 250 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 LINC00271P0C7V0 271 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 CKBP12277 381 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 HOXD8P13378 290 aaPredicted RBP7.88□□□□□ -1.15
HERC1-208ENST00000560462 DNAJB1P25685 340 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 PLCD1P51178 756 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 FOXC1Q12948 553 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 TDGQ13569 410 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 ABCB5Q2M3G0 1257 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 COL28A1Q2UY09 1125 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 PROX2Q3B8N5 592 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 SWT1Q5T5J6 900 aaKnown RBP7.88□□□□□ -1.15
HERC1-208ENST00000560462 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 POTEGQ6S5H5 508 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 FAM133AQ8N9E0 248 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 VN1R2Q8NFZ6 395 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 MAP4K1Q92918 833 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 PLVAPQ9BX97 442 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 POMKQ9H5K3 350 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 CABP5Q9NP86 173 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 SEMA4GQ9NTN9 838 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 FBXO4Q9UKT5 387 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
HERC1-208ENST00000560462 SIT1Q9Y3P8 196 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 MICAL3Q7RTP6 2002 aa7.88□□□□□ -1.15
HERC1-208ENST00000560462 ABCA12Q86UK0 2595 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 MYO10Q9HD67 2058 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 PER2O15055 1255 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 SNPHO15079 494 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 FOXD2O60548 495 aaPredicted RBP7.87□□□□□ -1.15
HERC1-208ENST00000560462 KCNK5O95279 499 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 LDHCP07864 332 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 TECP42680 631 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 CPT1AP50416 773 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 GSTO1P78417 241 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 RBL2Q08999 1139 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 CCDC6Q16204 474 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 TMEM63BQ5T3F8 832 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 ANKRD54Q6NXT1 300 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 TATDN1Q6P1N9 297 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 TBC1D9Q6ZT07 1266 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 MAPKAPK5Q8IW41 473 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 ZBTB44Q8NCP5 570 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 DBF4BQ8NFT6 615 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
HERC1-208ENST00000560462 ZNF384Q8TF68 577 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 DNAAF4Q8WXU2 420 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 CLP1Q92989 425 aaKnown RBP7.87□□□□□ -1.15
HERC1-208ENST00000560462 FGD4Q96M96 766 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 NECTIN4Q96NY8 510 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 STK31Q9BXU1 1019 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 TBC1D17Q9HA65 648 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 ZSCAN32Q9NX65 697 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 RAB23Q9ULC3 237 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 ADAMTS5Q9UNA0 930 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 DUSP12Q9UNI6 340 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 WASF3Q9UPY6 502 aa7.87□□□□□ -1.15
HERC1-208ENST00000560462 FLT1P17948 1338 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 A0A1W2PRG0 241 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 RBAK-RBAKDNI3L0D1 243 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 VWA5AO00534 786 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 TM4SF5O14894 197 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 WDR46O15213 610 aaKnown RBP7.86□□□□□ -1.15
HERC1-208ENST00000560462 LAMTOR5O43504 91 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 LILRB5O75023 590 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 PRB1P04280 392 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CSTF1Q05048 431 aaKnown RBP7.86□□□□□ -1.15
HERC1-208ENST00000560462 SRSF1Q07955 248 aaKnown RBP eCLIP7.86□□□□□ -1.15
HERC1-208ENST00000560462 NR6A1Q15406 480 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CSRP2Q16527 193 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CERKLQ49MI3 558 aaPredicted RBP7.86□□□□□ -1.15
HERC1-208ENST00000560462 KIAA1755Q5JYT7 1200 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 IQSEC1Q6DN90 963 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 LAIR1Q6GTX8 287 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 SYCE2Q6PIF2 218 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 SPICE1Q8N0Z3 855 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 DHX38Q92620 1227 aaKnown RBP7.86□□□□□ -1.15
HERC1-208ENST00000560462 P2RX5Q93086 422 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CDCA3Q99618 268 aaPredicted RBP7.86□□□□□ -1.15
HERC1-208ENST00000560462 WNT16Q9UBV4 365 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CDH22Q9UJ99 828 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 CFAP46Q8IYW2 2715 aa7.86□□□□□ -1.15
HERC1-208ENST00000560462 EMSYQ7Z589 1322 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 ADGRA3Q8IWK6 1321 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 J3QKU1 62 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 GRM8O00222 908 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 ITGB1P05556 798 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 RETP07949 1114 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 MMP3P08254 477 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 CFHP08603 1231 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 HOXB8P17481 243 aaPredicted RBP7.85□□□□□ -1.15
HERC1-208ENST00000560462 PHKA1P46020 1223 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 CHMP4BP1P59074 171 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms