RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-215ENST00000560424 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-215ENST00000560424 C5orf42Q9H799 3197 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-215ENST00000560424 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 TTC41PQ6P2S7 1318 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
SMAD3-215ENST00000560424 PROB1E7EW31 1015 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 M0R2C6 588 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-215ENST00000560424 EYA4O95677 639 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 MX1P20591 662 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-215ENST00000560424 TTC22Q5TAA0 569 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 ARHGEF16Q5VV41 709 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 SMRP1Q8NCR6 262 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 NKD2Q969F2 451 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-215ENST00000560424 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-215ENST00000560424 IWS1Q96ST2 819 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 RMDN3Q96TC7 470 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 ECHDC1Q9NTX5 307 aa10.83□□□□□ -0.68
SMAD3-215ENST00000560424 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 HAS3O00219 553 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 CAND2O75155 1236 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 GNAT1P11488 350 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 ICAM3P32942 547 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 COASYQ13057 564 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 CBX2Q14781 532 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 MCF2L2Q86YR7 1114 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 EFHBQ8N7U6 833 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 RGS22Q8NE09 1264 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 ASIC4Q96FT7 647 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 MSLNLQ96KJ4 702 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 SPATA33Q96N06 139 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 ALG13Q9NP73 1137 aaKnown RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 IL17RBQ9NRM6 502 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 DDX41Q9UJV9 622 aaKnown RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 USP15Q9Y4E8 981 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-215ENST00000560424 MYO15AQ9UKN7 3530 aa10.82□□□□□ -0.68
SMAD3-215ENST00000560424 SORBS3O60504 671 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 SRGAP2BP0DMP2 458 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 GSPT1P15170 499 aaKnown RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 EIF2AK2P19525 551 aaKnown RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 NBL1P41271 181 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 NRIP1P48552 1158 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 CTDSPL2Q05D32 466 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 PTPN21Q16825 1174 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 RBM23Q86U06 439 aaKnown RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 OTUD7AQ8TE49 926 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 RIPOR3Q96MK2 946 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 TAAR1Q96RJ0 339 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 BARX2Q9UMQ3 279 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-215ENST00000560424 ATG2AQ2TAZ0 1938 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 ABCB11O95342 1321 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 PLXNA3P51805 1871 aa10.81□□□□□ -0.68
SMAD3-215ENST00000560424 KIAA1217Q5T5P2 1943 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 CACNA1HO95180 2353 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 TRIOO75962 3097 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 FSD2A1L4K1 749 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 RBAK-RBAKDNI3L0D1 243 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 TREHO43280 583 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 NAALADL2Q58DX5 795 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 KCNV1Q6PIU1 500 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 PI4K2BQ8TCG2 481 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 MICAL1Q8TDZ2 1067 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
SMAD3-215ENST00000560424 P2RX5Q93086 422 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 TMEM47Q9BQJ4 181 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 MAF1Q9H063 256 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 MLXIPQ9HAP2 919 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 CLEC1BQ9P126 229 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMAD3-215ENST00000560424 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
SMAD3-215ENST00000560424 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 CCDC171Q6TFL3 1326 aa10.8□□□□□ -0.68
SMAD3-215ENST00000560424 H3BRB1 525 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 NOP56O00567 594 aaKnown RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 DHX16O60231 1041 aaKnown RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 GGPS1O95749 300 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 SMIM10L2AP0DMW4 78 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 SMIM10L2BP0DMW5 78 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 PDHBP11177 359 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 MYCLP12524 364 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 ATF7P17544 494 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 HIC1Q14526 733 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 HSDL1Q3SXM5 330 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 SYTL5Q8TDW5 730 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms