RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 NUF2Q9BZD4 464 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 SGK1O00141 431 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 ANXA13P27216 316 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 ELF2Q15723 593 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 ZNF449Q6P9G9 518 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 STRBPQ96SI9 672 aaKnown RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 MAPK4P31152 587 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 ARHGAP4P98171 946 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 SMYD4Q8IYR2 804 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 CDKL2Q92772 493 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 HAUS4Q9H6D7 363 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 SNAP23O00161 211 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 MAP7Q14244 749 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 BRIP1Q9BX63 1249 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 IQCA1LA6NCM1 817 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 PLCG1P19174 1290 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 SPP2Q13103 211 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 CAPN12Q6ZSI9 719 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 CATSPER4Q7RTX7 472 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 LAMC1P11047 1609 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 CTNNA1P35221 906 aaKnown RBP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 TCP11Q8WWU5 503 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 TTC1Q99614 292 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 SLC8A2Q9UPR5 921 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 MAP2P11137 1827 aaKnown RBP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 SRGAP2BP0DMP2 458 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 RASSF7Q02833 373 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 MAN2A1Q16706 1144 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 TXNRD1Q16881 649 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 DSTYKQ6XUX3 929 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 CCNYQ8ND76 341 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 CLTCL1P53675 1640 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 GOLGA8SH3BPF8 625 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 COBLO75128 1261 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 ZNF853P0CG23 659 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 ATF2P15336 505 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 ZNF658Q5TYW1 1059 aaPredicted RBP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 FEM1BQ9UK73 627 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 STX2P32856 288 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 ZNF653Q96CK0 615 aa14.61□□□□□ -0.07
TRAF3-208ENST00000560371 MRPL47Q9HD33 250 aaKnown RBP14.61□□□□□ -0.07
TRAF3-208ENST00000560371 ECE1P42892 770 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 SLFN12LQ6IEE8 588 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 PLA2R1Q13018 1463 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 PEX3P56589 373 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 PKP1Q13835 747 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 C1orf228Q6PIY5 440 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 CELF1Q92879 486 aaKnown RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 EMILIN3Q9NT22 766 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 MXI1P50539 228 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 EHHADHQ08426 723 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 ALCAMQ13740 583 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 PPP1R2P3Q6NXS1 205 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 PKNOX2Q96KN3 472 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 SPON1Q9HCB6 807 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 POLIQ9UNA4 740 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 ALKQ9UM73 1620 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 SNRNP48Q6IEG0 339 aaKnown RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 CYP19A1P11511 503 aaPredicted RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 NXNQ6DKJ4 435 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 SIX6OS1Q8N1H7 587 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 EIF3CLB5ME19 914 aaKnown RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 CCDC13Q8IYE1 715 aa14.6□□□□□ -0.07
TRAF3-208ENST00000560371 EIF3CQ99613 913 aaKnown RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 UBE2TQ9NPD8 197 aaPredicted RBP14.6□□□□□ -0.07
TRAF3-208ENST00000560371 CRB1P82279 1406 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 CYP2E1P05181 493 aaPredicted RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 NAA25Q14CX7 972 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 NAA35Q5VZE5 725 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 RFX6Q8HWS3 928 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 TAB3Q8N5C8 712 aaPredicted RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 GDAP1L1Q96MZ0 367 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 A2ML1A8K2U0 1454 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 ZBTB5O15062 677 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 JAK3P52333 1124 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 PSMD2Q13200 908 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 TWF2Q6IBS0 349 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 STAG1Q8WVM7 1258 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 MAGOHBQ96A72 148 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 PTPN22Q9Y2R2 807 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 KCNQ2O43526 872 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 ARL4AP40617 200 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 VCX3BQ9H321 246 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 HOMER3Q9NSC5 361 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 OGFRQ9NZT2 677 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 UTYO14607 1347 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 RNF17Q9BXT8 1623 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 TROVE2P10155 538 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 CD58P19256 250 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 TRMT2AQ8IZ69 625 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 BBOF1Q8ND07 529 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 PARD3BQ8TEW8 1205 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms