RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 ZBTB33Q86T24 672 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 SERINC5Q86VE9 423 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
APH1B-208ENST00000560353 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
APH1B-208ENST00000560353 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
APH1B-208ENST00000560353 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
APH1B-208ENST00000560353 MYH4Q9Y623 1939 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 HAS3O00219 553 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 F2P00734 622 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 CHGBP05060 677 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
APH1B-208ENST00000560353 ZNF200P98182 395 aaPredicted RBP12.15□□□□□ -0.46
APH1B-208ENST00000560353 TFAP4Q01664 338 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 CAMK1Q14012 370 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 LY6KQ17RY6 165 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 APBB2Q92870 758 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 RMDN1Q96DB5 314 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 HAUS7Q99871 368 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 BOLA2Q9H3K6 86 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
APH1B-208ENST00000560353 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 PLIN4Q96Q06 1357 aa12.15□□□□□ -0.46
APH1B-208ENST00000560353 LCTP09848 1927 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 LINC00271P0C7V0 271 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 ATP5JP18859 108 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 SEPT14Q6ZU15 432 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 UBALD2Q8IYN6 164 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 TMEM105Q8N8V8 129 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 CLEC4DQ8WXI8 215 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
APH1B-208ENST00000560353 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 DNAH14Q0VDD8 3507 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 RALGAPA2Q2PPJ7 1873 aa12.14□□□□□ -0.47
APH1B-208ENST00000560353 ADGRA3Q8IWK6 1321 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 CHD8Q9HCK8 2581 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 RBAK-RBAKDNI3L0D1 243 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 CAND2O75155 1236 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 CSPG5O95196 566 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 SLC3A2P08195 630 aaKnown RBP12.13□□□□□ -0.47
APH1B-208ENST00000560353 NRIP1P48552 1158 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 TDO2P48775 406 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 LAMC2Q13753 1193 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 PUM1Q14671 1186 aaKnown RBP eCLIP12.13□□□□□ -0.47
APH1B-208ENST00000560353 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 SUSD6Q92537 303 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 P2RX5Q93086 422 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
APH1B-208ENST00000560353 EP300Q09472 2414 aaPredicted RBP12.13□□□□□ -0.47
APH1B-208ENST00000560353 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 TPRP12270 2363 aaKnown RBP12.13□□□□□ -0.47
APH1B-208ENST00000560353 ACACBO00763 2458 aa12.13□□□□□ -0.47
APH1B-208ENST00000560353 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
APH1B-208ENST00000560353 ZNF286BP0CG31 522 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 GNAT2P19087 354 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
APH1B-208ENST00000560353 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 ADGRD2Q7Z7M1 963 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 PPTC7Q8NI37 304 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 TLE6Q9H808 572 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 DDX41Q9UJV9 622 aaKnown RBP12.12□□□□□ -0.47
APH1B-208ENST00000560353 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
APH1B-208ENST00000560353 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 GLP2RO95838 553 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 APPP05067 770 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 DNAJB1P25685 340 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 SLC16A2P36021 539 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 CLCN5P51795 746 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 HIC1Q14526 733 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 STXBP2Q15833 593 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
APH1B-208ENST00000560353 KREMEN2Q8NCW0 462 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 SPPL3Q8TCT6 385 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 ATP6V0A1Q93050 837 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 MAF1Q9H063 256 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 SEMA4AQ9H3S1 761 aa12.11□□□□□ -0.47
APH1B-208ENST00000560353 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
APH1B-208ENST00000560353 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
APH1B-208ENST00000560353 IWS1Q96ST2 819 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
APH1B-208ENST00000560353 RC3H2Q9HBD1 1191 aaKnown RBP12.1□□□□□ -0.47
APH1B-208ENST00000560353 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms