RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NFRKBQ6P4R8 1299 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 METTL7BQ6UX53 244 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 TRIM50Q86XT4 487 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 GPRASP2Q96D09 838 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 GPR20Q99678 358 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 MXRA8Q9BRK3 442 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 HDAC6Q9UBN7 1215 aa16.96■□□□□ 0.31
RABGGTA-211ENST00000559850 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 CTDNEP1O95476 244 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 LGALS2P05162 132 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 ACRP10323 421 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 HOXD8P13378 290 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 SREBF1P36956 1147 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 NLRP5P59047 1200 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 ARHGAP4P98171 946 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 HIC1Q14526 733 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 SCLYQ96I15 445 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 C16orf70Q9BSU1 422 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 WNT8AQ9H1J5 351 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 GJB4Q9NTQ9 266 aa16.95■□□□□ 0.3
RABGGTA-211ENST00000559850 HAS3O00219 553 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 DEXIO95424 95 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 ZNF76P36508 570 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 ZNF200P98182 395 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 ANKRD1Q15327 319 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 PTGISQ16647 500 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 C7orf31Q8N865 590 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 CTAGE1Q96RT6 745 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 KCNH7Q9NS40 1196 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 KCNJ14Q9UNX9 436 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
RABGGTA-211ENST00000559850 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 GNA11P29992 359 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 KIF2CQ99661 725 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 KATNAL1Q9BW62 490 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 AGO4Q9HCK5 861 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 GTF2IRD1Q9UHL9 959 aa16.93■□□□□ 0.3
RABGGTA-211ENST00000559850 GSTTP1A0A1W2PQM5 241 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 H3BRB1 525 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 DDX39AO00148 427 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 SUPT20HL2P0C7V6 817 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 FOSBP53539 338 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 PTPN11Q06124 597 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 ST3GAL1Q11201 340 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 TMEM199Q8N511 208 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 CRYGNQ8WXF5 182 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 GTF3C6Q969F1 213 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.92■□□□□ 0.32e-9■□□□□ 9
RABGGTA-211ENST00000559850 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 TUT1Q9H6E5 874 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
RABGGTA-211ENST00000559850 GBF1Q92538 1859 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 MEIS1O00470 390 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 EDIL3O43854 480 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 CDKL5O76039 1030 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.39e-11■■■□□ 14.6
RABGGTA-211ENST00000559850 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 WNT8BQ93098 351 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 PCDHA4Q9UN74 947 aa16.91■□□□□ 0.3
RABGGTA-211ENST00000559850 IGLV3-22A0A075B6J6 115 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 JAK2O60674 1132 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 SMIM10L2AP0DMW4 78 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 SMIM10L2BP0DMW5 78 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 FDPSP14324 419 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 MARK3P27448 753 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 NPY5RQ15761 445 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 LRIT3Q3SXY7 679 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 TEX2Q8IWB9 1127 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 BLIDQ8IZY5 108 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 VWCEQ96DN2 955 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 JPH1Q9HDC5 661 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 KAT6AQ92794 2004 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 STK36Q9NRP7 1315 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
RABGGTA-211ENST00000559850 CYP3A4P08684 503 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms