RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 C4orf32Q8N8J7 132 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PPTC7Q8NI37 304 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 HAS1Q92839 578 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 RAB34Q9BZG1 259 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SCAND2PQ9GZW5 306 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 UPF3AQ9H1J1 476 aaKnown RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 MLXIPQ9HAP2 919 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PCDHA12Q9UN75 941 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PCDHB6Q9Y5E3 794 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 DOCK3Q8IZD9 2030 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 LCTP09848 1927 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 A6NJR5 290 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 SLC26A4O43511 780 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ZEB2O60315 1214 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 MARCH6O60337 910 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 GAS7O60861 476 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ATP9AO75110 1047 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 FARP2O94887 1054 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ATG7O95352 703 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ARIH2O95376 493 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 GGPS1O95749 300 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 CCL5P13501 91 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 CCND3P30281 292 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 JAK3P52333 1124 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ARHGAP1Q07960 439 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 LY6KQ17RY6 165 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 TMEM266Q2M3C6 531 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 LRCH2Q5VUJ6 765 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 LHX8Q68G74 356 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 B3GNT9Q6UX72 402 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 CLEC17AQ6ZS10 378 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 KCTD17Q8N5Z5 321 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ARRDC4Q8NCT1 418 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 KCNG4Q8TDN1 519 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 SEZ6LQ9BYH1 1024 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 AP5M1Q9H0R1 490 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 RNF208Q9H0X6 261 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 JPH1Q9HDC5 661 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 SLC9A2Q9UBY0 812 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 DDX49Q9Y6V7 483 aaKnown RBP9.81□□□□□ -0.84
LRRC28-215ENST00000559774 ZSWIM8A7E2V4 1837 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 PLXNA1Q9UIW2 1896 aa9.81□□□□□ -0.84
LRRC28-215ENST00000559774 LRRC37A2A6NM11 1700 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-215ENST00000559774 WNT7AO00755 349 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 PPP6R2O75170 966 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 CABYRO75952 493 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 MUTP22033 750 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 ITGB3BPQ13352 177 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-215ENST00000559774 PTPAQ15257 358 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 DGKDQ16760 1214 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 DTHD1Q6ZMT9 781 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 CYFIP1Q7L576 1253 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 RNF180Q86T96 592 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 TLK2Q86UE8 772 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 ANKLE1Q8NAG6 615 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 PCSK9Q8NBP7 692 aaKnown RBP9.8□□□□□ -0.84
LRRC28-215ENST00000559774 LINC00301Q8NCQ3 95 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 KLHDC9Q8NEP7 349 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 AK8Q96MA6 479 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 SPATA33Q96N06 139 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 USP28Q96RU2 1077 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 TMEM60Q9H2L4 133 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-215ENST00000559774 XPNPEP3Q9NQH7 507 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 RCOR1Q9UKL0 485 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 PCDHA10Q9Y5I2 948 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 SRPRBQ9Y5M8 271 aaKnown RBP9.8□□□□□ -0.84
LRRC28-215ENST00000559774 ELP1O95163 1332 aa9.8□□□□□ -0.84
LRRC28-215ENST00000559774 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 WDR64B1ANS9 1081 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 NOP56O00567 594 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 SPTLC2O15270 562 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 DYNC1LI2O43237 492 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 ADCY6O43306 1168 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 DKC1O60832 514 aaKnown RBP eCLIP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 ADAMTS4O75173 837 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 SGPL1O95470 568 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 LONP1P36776 959 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 TXKP42681 527 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 GJA8P48165 433 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 SLC26A2P50443 739 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 SPIRE1Q08AE8 756 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms