RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 SLC27A2O14975 620 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 NKRFO15226 690 aaKnown RBP eCLIP6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 LRG1P02750 347 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 ITGA1P56199 1179 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 ERICH6BQ5W0A0 696 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 NPM2Q86SE8 214 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 CARFQ8N187 725 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 LILRB2Q8N423 598 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 CLEC4DQ8WXI8 215 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 PTPRN2Q92932 1015 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 OSBPL2Q9H1P3 480 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 DTLQ9NZJ0 730 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 ASH2LQ9UBL3 628 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 WASF3Q9UPY6 502 aa6.33□□□□□ -1.4
CTDSPL2-207ENST00000559738 KRIT1O00522 736 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 CELA3BP08861 270 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 CYP4F22Q6NT55 531 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 TEPPQ6URK8 271 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 DPH6Q7L8W6 267 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 ZC3H18Q86VM9 953 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 UHMK1Q8TAS1 419 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 BDH2Q9BUT1 245 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 TELO2Q9Y4R8 837 aa6.32□□□□□ -1.4
CTDSPL2-207ENST00000559738 FAM47E-STBD1D6RA91 191 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 AQP7O14520 342 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 PRICKLE3O43900 615 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 LTFP02788 710 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 GNAT1P11488 350 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 THBS2P35442 1172 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 NKX3-2P78367 333 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 ADAM9Q13443 819 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 RTP5Q14D33 572 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 KYQ8NBH2 561 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 PCDH19Q8TAB3 1148 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 IPO9Q96P70 1041 aaKnown RBP6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 ALG1Q9BT22 464 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 PCDH18Q9HCL0 1135 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 NTMQ9P121 344 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
CTDSPL2-207ENST00000559738 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 SMARCA5O60264 1052 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 MAFKO60675 156 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 SARSP49591 514 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 GJA9P57773 515 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 GABREP78334 506 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 GRIN1Q05586 938 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 SPIRE1Q08AE8 756 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 PAK1Q13153 545 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 TUSC3Q13454 348 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 BMS1Q14692 1282 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 THAP3Q8WTV1 239 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 SLC52A2Q9HAB3 445 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 NGRNQ9NPE2 291 aaKnown RBP6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 PCDHA9Q9Y5H5 950 aa6.3□□□□□ -1.4
CTDSPL2-207ENST00000559738 ARVCFO00192 962 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 WNT9AO14904 365 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 CRTAMO95727 393 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 GUCY1A3Q02108 690 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 C2orf27AQ580R0 203 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 ZC3H12BQ5HYM0 836 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 TTLL7Q6ZT98 887 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 ZNF761Q86XN6 746 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 PROSER1Q86XN7 944 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 TTLL6Q8N841 843 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 TTLL11Q8NHH1 800 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 SLC7A14Q8TBB6 771 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 SH3RF2Q8TEC5 729 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 HSPBP1Q9NZL4 362 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 DSEQ9UL01 958 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 PTCH2Q9Y6C5 1203 aa6.29□□□□□ -1.4
CTDSPL2-207ENST00000559738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 NOBOXO60393 691 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 PLP2Q04941 152 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 FERMT3Q86UX7 667 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 TRIM48Q8IWZ4 208 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 GSTCDQ8NEC7 633 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 ZSWIM3Q96MP5 696 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 KRTAP17-1Q9BYP8 105 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 LNPKQ9C0E8 428 aa6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 PDGFDQ9GZP0 370 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-207ENST00000559738 CBLCQ9ULV8 474 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms