RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 CCDC194A0A1B0GVG4 234 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 B4DLN1 442 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 MSH4O15457 936 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 FIBPO43427 364 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 SGPL1O95470 568 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 PGK1P00558 417 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 TXNP10599 105 aaKnown RBP10.29□□□□□ -0.76
HMG20A-209ENST00000559728 CNGA1P29973 690 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 GJA9P57773 515 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 TNFAIP2Q03169 654 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 Q4G0T1 1027 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 PPP4R3AQ6IN85 833 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 MOXD1Q6UVY6 613 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 UBE2Q1Q7Z7E8 422 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 NEK8Q86SG6 692 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 C4orf32Q8N8J7 132 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 ETNPPLQ8TBG4 499 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 GJA10Q969M2 543 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 MPHOSPH6Q99547 160 aaKnown RBP10.29□□□□□ -0.76
HMG20A-209ENST00000559728 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
HMG20A-209ENST00000559728 Q9Y3F1 56 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
HMG20A-209ENST00000559728 MYH6P13533 1939 aa10.29□□□□□ -0.76
HMG20A-209ENST00000559728 STX6O43752 255 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 FARP2O94887 1054 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 TGFB3P10600 412 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 EN2P19622 333 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 CST5P28325 142 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 MTMR1Q13613 665 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 NBR1Q14596 966 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 TTLL4Q14679 1199 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 LRRC41Q15345 812 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 PRR16Q569H4 304 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 TMEM92Q6UXU6 159 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 TLK2Q86UE8 772 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 PLA2G4DQ86XP0 818 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 HAS1Q92839 578 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 SENP7Q9BQF6 1050 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 EHMT1Q9H9B1 1298 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 BRMS1Q9HCU9 246 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 KCNMB3Q9NPA1 279 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 XPNPEP3Q9NQH7 507 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
HMG20A-209ENST00000559728 MKI67P46013 3256 aaKnown RBP10.28□□□□□ -0.76
HMG20A-209ENST00000559728 A6NJR5 290 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 NKRFO15226 690 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMG20A-209ENST00000559728 MAFGO15525 162 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
HMG20A-209ENST00000559728 MSCO60682 206 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 GGPS1O95749 300 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 CCNE2O96020 404 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 RARBP10826 455 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 PDCP20941 246 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 BEX3Q00994 111 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMG20A-209ENST00000559728 HSDL1Q3SXM5 330 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 GNPTABQ3T906 1256 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 FAM173BQ6P4H8 233 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 NLRX1Q86UT6 975 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 FERMT3Q86UX7 667 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 DIS3LQ8TF46 1054 aaKnown RBP10.27□□□□□ -0.77
HMG20A-209ENST00000559728 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 MTMR9Q96QG7 549 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 PCDHB6Q9Y5E3 794 aa10.27□□□□□ -0.77
HMG20A-209ENST00000559728 GSTTP1A0A1W2PQM5 241 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 VPS37CA5D8V6 355 aaPredicted RBP10.26□□□□□ -0.77
HMG20A-209ENST00000559728 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 H3BQV1 296 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 SORBS3O60504 671 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
HMG20A-209ENST00000559728 PSMD10O75832 226 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 BRD1O95696 1058 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 GH1P01241 217 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 COL6A1P12109 1028 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 GCFC2P16383 781 aaKnown RBP10.26□□□□□ -0.77
HMG20A-209ENST00000559728 TRAPPC10P48553 1259 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 BECN1Q14457 450 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 KCNV1Q6PIU1 500 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 METTL7BQ6UX53 244 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 AFG1LQ8WV93 481 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 PCYT2Q99447 389 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 GPR20Q99678 358 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.26□□□□□ -0.77
HMG20A-209ENST00000559728 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 DDX25Q9UHL0 483 aaKnown RBP10.26□□□□□ -0.77
HMG20A-209ENST00000559728 VAV3Q9UKW4 847 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 MCM3APO60318 1980 aa10.26□□□□□ -0.77
HMG20A-209ENST00000559728 NFASCO94856 1347 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms