RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 IFIT3O14879 490 aaKnown RBP15.16■□□□□ 0.02
TPM1-220ENST00000559556 SORBS3O60504 671 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 STAM2O75886 525 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 LGALS2P05162 132 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 ICAM3P32942 547 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
TPM1-220ENST00000559556 PTH1RQ03431 593 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 WTAPQ15007 396 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 FCHSD1Q86WN1 690 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 RUFY2Q8WXA3 655 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 INPP4AQ96PE3 977 aaPredicted RBP15.16■□□□□ 0.02
TPM1-220ENST00000559556 TUT1Q9H6E5 874 aaKnown RBP15.16■□□□□ 0.02
TPM1-220ENST00000559556 SUGCTQ9HAC7 445 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 MLXIPQ9HAP2 919 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 E7EWF7 191 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 CHMLP26374 656 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
TPM1-220ENST00000559556 GNPTABQ3T906 1256 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
TPM1-220ENST00000559556 NCOA7Q8NI08 942 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 TAF6LQ9Y6J9 622 aa15.15■□□□□ 0.02
TPM1-220ENST00000559556 C17orf102A2RUQ5 167 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 RSPH10B2B2RC85 870 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 CAND2O75155 1236 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 RSPH10BP0C881 870 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 SMIM10L2AP0DMW4 78 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 SMIM10L2BP0DMW5 78 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 THPOP40225 353 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 HTRA4P83105 476 aaPredicted RBP15.14■□□□□ 0.01
TPM1-220ENST00000559556 SEMA3FQ13275 785 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 METTL7BQ6UX53 244 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 DBF4BQ8NFT6 615 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
TPM1-220ENST00000559556 ATP6V0A1Q93050 837 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
TPM1-220ENST00000559556 MAP3K14Q99558 947 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 C1QTNF1Q9BXJ1 281 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 USP26Q9BXU7 913 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 BCAS3Q9H6U6 928 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
TPM1-220ENST00000559556 SPATA31C2B4DYI2 1134 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 RBAK-RBAKDNI3L0D1 243 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 NOP56O00567 594 aaKnown RBP15.13■□□□□ 0.01
TPM1-220ENST00000559556 SGSM2O43147 1006 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 TREHO43280 583 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 FIBPO43427 364 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 AMHP03971 560 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 ANTXR2P58335 489 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 NEDD9Q14511 834 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 FAM117BQ6P1L5 589 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
TPM1-220ENST00000559556 CATIPQ7Z7H3 387 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
TPM1-220ENST00000559556 RNPEPQ9H4A4 650 aa15.13■□□□□ 0.01
TPM1-220ENST00000559556 ADAM17P78536 824 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 CYFIP1Q7L576 1253 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 MYOCDQ8IZQ8 938 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 FBXO22Q8NEZ5 403 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 IGDCC4Q8TDY8 1250 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
TPM1-220ENST00000559556 GPR20Q99678 358 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
TPM1-220ENST00000559556 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 DDAH1O94760 285 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 TRIM50Q86XT4 487 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 SEPT8Q92599 483 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 SAMD11Q96NU1 681 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 SENP7Q9BQF6 1050 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 UBE2ZQ9H832 354 aaPredicted RBP15.11■□□□□ 0.01
TPM1-220ENST00000559556 LY9Q9HBG7 655 aa15.11■□□□□ 0.01
TPM1-220ENST00000559556 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
TPM1-220ENST00000559556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.1■□□□□ 0.01
TPM1-220ENST00000559556 MEIS2O14770 477 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 CTSHP09668 335 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 GNAT1P11488 350 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 SMARCA1P28370 1054 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 PIBF1Q8WXW3 757 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 TOP1MTQ969P6 601 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 RRP36Q96EU6 259 aaKnown RBP15.1■□□□□ 0.01
TPM1-220ENST00000559556 MTA3Q9BTC8 594 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 OSBPL7Q9BZF2 842 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 SETD4Q9NVD3 440 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 MYO10Q9HD67 2058 aa15.1■□□□□ 0.01
TPM1-220ENST00000559556 ZDBF2Q9HCK1 2354 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.09■□□□□ 0.01
TPM1-220ENST00000559556 KIF5BP33176 963 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 PLA2G5P39877 138 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 FAM26DQ5JW98 314 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 GIMAP8Q8ND71 665 aaPredicted RBP15.09■□□□□ 0.01
TPM1-220ENST00000559556 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms