RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 AP3B2Q13367 1082 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 BFSP2Q13515 415 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 GDF6Q6KF10 455 aaPredicted RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 DEFB128Q7Z7B8 93 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 REXO1Q8N1G1 1221 aaKnown RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 DEFB123Q8N688 67 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 GIMAP8Q8ND71 665 aaPredicted RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 WNT8AQ9H1J5 351 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 GTF2IRD1Q9UHL9 959 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
SNX1-207ENST00000559401 UBIAD1Q9Y5Z9 338 aa9.36□□□□□ -0.91
SNX1-207ENST00000559401 TRIP12Q14669 1992 aaPredicted RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 H3BRB1 525 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 ATP9AO75110 1047 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 FGBP02675 491 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 GNA11P29992 359 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 TCF7P36402 384 aaPredicted RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 EVCP57679 992 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 NLRP5P59047 1200 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 ANAPC15P60006 121 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 NTRK3Q16288 839 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 PKN1Q16512 942 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 OTOP2Q7RTS6 562 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 TEX2Q8IWB9 1127 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 RPUSD2Q8IZ73 545 aaKnown RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 ZNF274Q96GC6 653 aaPredicted RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 FAM161BQ96MY7 647 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 GPR20Q99678 358 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 SENP7Q9BQF6 1050 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 MXRA8Q9BRK3 442 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 SDF4Q9BRK5 362 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX1-207ENST00000559401 SLKQ9H2G2 1235 aaPredicted RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 TUT1Q9H6E5 874 aaKnown RBP9.35□□□□□ -0.91
SNX1-207ENST00000559401 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
SNX1-207ENST00000559401 KAT6AQ92794 2004 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 GBF1Q92538 1859 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 ESYT2A0FGR8 921 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 C17orf102A2RUQ5 167 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 DDX39AO00148 427 aaKnown RBP9.34□□□□□ -0.91
SNX1-207ENST00000559401 HAS3O00219 553 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 CDKL5O76039 1030 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 SMIM10L2AP0DMW4 78 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 SMIM10L2BP0DMW5 78 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
SNX1-207ENST00000559401 KCNA2P16389 499 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 SREBF1P36956 1147 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
SNX1-207ENST00000559401 ARHGAP4P98171 946 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 ZNF200P98182 395 aaPredicted RBP9.34□□□□□ -0.91
SNX1-207ENST00000559401 ANKRD1Q15327 319 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 CEP55Q53EZ4 464 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 MCTP2Q6DN12 878 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 C16orf59Q7L2K0 433 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 SESTD1Q86VW0 696 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 CYP2W1Q8TAV3 490 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 CAGE1Q8TC20 777 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 GLG1Q92896 1179 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 C16orf70Q9BSU1 422 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 ZMYND12Q9H0C1 365 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 JPH1Q9HDC5 661 aaPredicted RBP9.34□□□□□ -0.91
SNX1-207ENST00000559401 KCNH7Q9NS40 1196 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 TELO2Q9Y4R8 837 aa9.34□□□□□ -0.91
SNX1-207ENST00000559401 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.33□□□□□ -0.92
SNX1-207ENST00000559401 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.33□□□□□ -0.92
SNX1-207ENST00000559401 MAFGO15525 162 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 DEXIO95424 95 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 PFKMP08237 780 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 ARP10275 920 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 ACTN1P12814 892 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 MARK3P27448 753 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 RFC2P35250 354 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 AK2P54819 239 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
SNX1-207ENST00000559401 PTK7Q13308 1070 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 LRRC8DQ7L1W4 858 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 PLA2G4DQ86XP0 818 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 SEPT1Q8WYJ6 367 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
SNX1-207ENST00000559401 ATP6V0A1Q93050 837 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 AZI2Q9H6S1 392 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 SLC9A2Q9UBY0 812 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 TCEAL9Q9UHQ7 104 aa9.33□□□□□ -0.92
SNX1-207ENST00000559401 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 DTNBO60941 627 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 SEC24BO95487 1268 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 GNAT1P11488 350 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms