RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 DEFB103AP81534 67 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 MRPS5P82675 430 aaKnown RBP17.2■□□□□ 0.34
LRRC28-213ENST00000559399 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 IKBKEQ14164 716 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 MBTPS1Q14703 1052 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 NECTIN1Q15223 517 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 CYFIP1Q7L576 1253 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 GPR20Q99678 358 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 ZBED2Q9BTP6 218 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
LRRC28-213ENST00000559399 SPTBN5Q9NRC6 3674 aaKnown RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 EPOPA6NHQ4 379 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 RFXAPO00287 272 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 LGR5O75473 907 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 POU3F3P20264 500 aaPredicted RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 TMCO2Q7Z6W1 182 aaPredicted RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 NLRX1Q86UT6 975 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 SENP7Q9BQF6 1050 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
LRRC28-213ENST00000559399 ZNF215Q9UL58 517 aaPredicted RBP17.19■□□□□ 0.34
LRRC28-213ENST00000559399 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 RSPH10B2B2RC85 870 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 GJB5O95377 273 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 RSPH10BP0C881 870 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 SGMS1Q86VZ5 419 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 GIMAP8Q8ND71 665 aaPredicted RBP17.18■□□□□ 0.34
LRRC28-213ENST00000559399 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 MTCH2Q9Y6C9 303 aa17.18■□□□□ 0.34
LRRC28-213ENST00000559399 TREHO43280 583 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 CAND2O75155 1236 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 GNAT1P11488 350 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 SP4Q02446 784 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 SKIV2LQ15477 1246 aaKnown RBP17.17■□□□□ 0.34
LRRC28-213ENST00000559399 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 GPRASP2Q96D09 838 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 CDHR1Q96JP9 859 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 RAD9AQ99638 391 aa17.17■□□□□ 0.34
LRRC28-213ENST00000559399 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
LRRC28-213ENST00000559399 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
LRRC28-213ENST00000559399 HEATR3Q7Z4Q2 680 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 ADAMTS19Q8TE59 1207 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
LRRC28-213ENST00000559399 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 AMHP03971 560 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 ITGB5P18084 799 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 GRB10Q13322 594 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 MTMR1Q13613 665 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 UBE2SQ16763 222 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 SETD4Q9NVD3 440 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 TELO2Q9Y4R8 837 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 KIAA1217Q5T5P2 1943 aa17.15■□□□□ 0.34
LRRC28-213ENST00000559399 SCN5AQ14524 2016 aa17.14■□□□□ 0.34
LRRC28-213ENST00000559399 CTSHP09668 335 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 KCNA2P16389 499 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
LRRC28-213ENST00000559399 AAK1Q2M2I8 961 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 KRT40Q6A162 431 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
LRRC28-213ENST00000559399 SKAP1Q86WV1 359 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 LMBR1Q8WVP7 490 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 SEPT8Q92599 483 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 RBM28Q9NW13 759 aaKnown RBP17.14■□□□□ 0.33
LRRC28-213ENST00000559399 NRCAMQ92823 1304 aa17.14■□□□□ 0.33
LRRC28-213ENST00000559399 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 LPXNO60711 386 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 ATP9AO75110 1047 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
LRRC28-213ENST00000559399 APOA5Q6Q788 366 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 TGS1Q96RS0 853 aaKnown RBP17.13■□□□□ 0.33
LRRC28-213ENST00000559399 UHRF1Q96T88 793 aaPredicted RBP17.13■□□□□ 0.33
LRRC28-213ENST00000559399 EHMT1Q9H9B1 1298 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
LRRC28-213ENST00000559399 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms