RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 GDF6Q6KF10 455 aaPredicted RBP12.54□□□□□ -0.4
SPG11-216ENST00000559347 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 NLRX1Q86UT6 975 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 SENP7Q9BQF6 1050 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 GLT8D2Q9H1C3 349 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 UBIAD1Q9Y5Z9 338 aa12.54□□□□□ -0.4
SPG11-216ENST00000559347 NOP56O00567 594 aaKnown RBP12.53□□□□□ -0.4
SPG11-216ENST00000559347 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 FOSP01100 380 aaPredicted RBP12.53□□□□□ -0.4
SPG11-216ENST00000559347 LGALS2P05162 132 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ACRP10323 421 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 KCNA2P16389 499 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 SREBF1P36956 1147 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ANAPC15P60006 121 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 MTMR1Q13613 665 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 TMEM240Q5SV17 173 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 Q7L0L9 218 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 IL17RAQ96F46 866 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ZNF274Q96GC6 653 aaPredicted RBP12.53□□□□□ -0.4
SPG11-216ENST00000559347 SCLYQ96I15 445 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 CDHR1Q96JP9 859 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 GPR20Q99678 358 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 NOD1Q9Y239 953 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 TRANK1O15050 2925 aa12.53□□□□□ -0.4
SPG11-216ENST00000559347 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 ATP9AO75110 1047 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
SPG11-216ENST00000559347 RBL2Q08999 1139 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 PTGISQ16647 500 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 ZNF365Q70YC5 407 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 TRIM50Q86XT4 487 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 C7orf31Q8N865 590 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
SPG11-216ENST00000559347 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.41
SPG11-216ENST00000559347 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
SPG11-216ENST00000559347 SLC26A6Q9BXS9 759 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 JADE2Q9NQC1 790 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 PDRG1Q9NUG6 133 aa12.52□□□□□ -0.41
SPG11-216ENST00000559347 MYH9P35579 1960 aaKnown RBP12.51□□□□□ -0.41
SPG11-216ENST00000559347 H3BRB1 525 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 HOXC8P31273 242 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
SPG11-216ENST00000559347 SP4Q02446 784 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 STK3Q13188 491 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 BFSP2Q13515 415 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 HIC1Q14526 733 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
SPG11-216ENST00000559347 DEFB123Q8N688 67 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
SPG11-216ENST00000559347 TUT1Q9H6E5 874 aaKnown RBP12.51□□□□□ -0.41
SPG11-216ENST00000559347 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
SPG11-216ENST00000559347 UNC80Q8N2C7 3258 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 MAFGO15525 162 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 PFKMP08237 780 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 RFC2P35250 354 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
SPG11-216ENST00000559347 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 CEP55Q53EZ4 464 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
SPG11-216ENST00000559347 CYP2W1Q8TAV3 490 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 HERVK_113Q902F9 699 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 KCNH7Q9NS40 1196 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
SPG11-216ENST00000559347 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 REV3LO60673 3130 aa12.5□□□□□ -0.41
SPG11-216ENST00000559347 NFASCO94856 1347 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 EMSYQ7Z589 1322 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 CPLX1O14810 134 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
SPG11-216ENST00000559347 SEC24BO95487 1268 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 FGBP02675 491 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
SPG11-216ENST00000559347 GNA11P29992 359 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms