RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 WDR81Q562E7 1941 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 DUSP11O75319 330 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 FARP2O94887 1054 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 BMP15O95972 392 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 MCM7P33993 719 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 ZNF76P36508 570 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 PTGDRQ13258 359 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 IL17AQ16552 155 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 SLC9C1Q4G0N8 1177 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 TBC1D22BQ9NU19 505 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 RCOR1Q9UKL0 485 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.28
SNRPA1-207ENST00000559309 ADAMTS4O75173 837 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 ATG7O95352 703 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 YEATS4O95619 227 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 TXNP10599 105 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 PPP2R5CQ13362 524 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 NEDD9Q14511 834 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 LY6KQ17RY6 165 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 CELF3Q5SZQ8 465 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 FOXD4L5Q5VV16 416 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 METTL7BQ6UX53 244 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 SLFN12Q8IYM2 578 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 IGSF22Q8N9C0 903 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 GIMAP8Q8ND71 665 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 FOXD4L4Q8WXT5 416 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
SNRPA1-207ENST00000559309 A6NJR5 290 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 CCNE2O96020 404 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 ATP2B1P20020 1258 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 GJA9P57773 515 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 MTFR1Q15390 333 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 CALCRLQ16602 461 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 COPS5Q92905 334 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 ZNF577Q9BSK1 485 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 HMX1Q9NP08 348 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 TELO2Q9Y4R8 837 aa16.75■□□□□ 0.27
SNRPA1-207ENST00000559309 IGKV6D-21A0A0A0MT36 114 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 MSCO60682 206 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 PPP6R2O75170 966 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 GGPS1O95749 300 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 GH1P01241 217 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 PTGS1P23219 599 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 CST5P28325 142 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 GJC2Q5T442 439 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 KLHDC9Q8NEP7 349 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 TNPO1Q92973 898 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 GJA10Q969M2 543 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 CRISPLD2Q9H0B8 497 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-207ENST00000559309 CCL5P13501 91 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 PDIA5Q14554 519 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 HSDL1Q3SXM5 330 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 CYFIP1Q7L576 1253 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 PPTC7Q8NI37 304 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 OGDHLQ9ULD0 1010 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 SRPRBQ9Y5M8 271 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-207ENST00000559309 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 KIAA0100Q14667 2235 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 GSTTP1A0A1W2PQM5 241 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 KRT85P78386 507 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 KRT76Q01546 638 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 LRCH2Q5VUJ6 765 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 ABHD15Q6UXT9 468 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 RDM1Q8NG50 284 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 LENG1Q96BZ8 264 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 GPR20Q99678 358 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 TTC12Q9H892 705 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 JPH1Q9HDC5 661 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 SLC9A2Q9UBY0 812 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
SNRPA1-207ENST00000559309 ELP1O95163 1332 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 EML1O00423 815 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 GAS7O60861 476 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 LGR5O75473 907 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 GJB1P08034 283 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 CAPN2P17655 700 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 TLK2Q86UE8 772 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms