RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 PCYT2Q99447 389 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 PCDHB6Q9Y5E3 794 aa12.38□□□□□ -0.43
TPM1-217ENST00000559108 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
TPM1-217ENST00000559108 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 TCHHQ07283 1943 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 A6NJR5 290 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 H3BQV1 296 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
TPM1-217ENST00000559108 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
TPM1-217ENST00000559108 CAPN15O75808 1086 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 TFRCP02786 760 aaKnown RBP12.37□□□□□ -0.43
TPM1-217ENST00000559108 ZNF286BP0CG31 522 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 TGFB3P10600 412 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 ZNF76P36508 570 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 SAFBQ15424 915 aaKnown RBP eCLIP12.37□□□□□ -0.43
TPM1-217ENST00000559108 ZNF174Q15697 407 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 KCNA10Q16322 511 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 PPP4R3AQ6IN85 833 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 MOXD1Q6UVY6 613 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 TRIM50Q86XT4 487 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 C4orf32Q8N8J7 132 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 KAT2BQ92831 832 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 PAWRQ96IZ0 340 aaKnown RBP12.37□□□□□ -0.43
TPM1-217ENST00000559108 GPR20Q99678 358 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 VAV3Q9UKW4 847 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 PHF24Q9UPV7 400 aa12.37□□□□□ -0.43
TPM1-217ENST00000559108 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
TPM1-217ENST00000559108 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
TPM1-217ENST00000559108 A0A1W2PQ45 241 aaPredicted RBP12.36□□□□□ -0.43
TPM1-217ENST00000559108 A0A1W2PQY0 241 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 DNM1LO00429 736 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM1-217ENST00000559108 PSMD10O75832 226 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 ASGR1P07306 291 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 MCM7P33993 719 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 ACLYP53396 1101 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 PSMC6P62333 389 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 PURAQ00577 322 aaKnown RBP12.36□□□□□ -0.43
TPM1-217ENST00000559108 HIC1Q14526 733 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 IL17AQ16552 155 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 METTL7BQ6UX53 244 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 DHX37Q8IY37 1157 aaKnown RBP12.36□□□□□ -0.43
TPM1-217ENST00000559108 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
TPM1-217ENST00000559108 Q9Y3F1 56 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 NFASCO94856 1347 aa12.36□□□□□ -0.43
TPM1-217ENST00000559108 EML1O00423 815 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 PDCP20941 246 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 ACTR2P61160 394 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 SETQ01105 290 aaPredicted RBP12.35□□□□□ -0.43
TPM1-217ENST00000559108 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 KCNV1Q6PIU1 500 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 UNC45AQ9H3U1 944 aa12.35□□□□□ -0.43
TPM1-217ENST00000559108 JPH1Q9HDC5 661 aaPredicted RBP12.35□□□□□ -0.43
TPM1-217ENST00000559108 SIP14410 1827 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 MAFGO15525 162 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 BRD1O95696 1058 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 LGALS2P05162 132 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
TPM1-217ENST00000559108 MYL3P08590 195 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 GCFC2P16383 781 aaKnown RBP12.34□□□□□ -0.43
TPM1-217ENST00000559108 LAMC2Q13753 1193 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 BECN1Q14457 450 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 NEDD9Q14511 834 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 UGCGQ16739 394 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 CCDC60Q8IWA6 550 aaPredicted RBP12.34□□□□□ -0.43
TPM1-217ENST00000559108 ANKLE1Q8NAG6 615 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 MLXIPQ9HAP2 919 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
TPM1-217ENST00000559108 DNAH12Q6ZR08 3092 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 HAS3O00219 553 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 TNRC18O15417 2968 aaPredicted RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 CHMP2AO43633 222 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 NEMFO60524 1076 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 ATG7O95352 703 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 F13A1P00488 732 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 F2P00734 622 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms