RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 Q4G0T1 1027 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 PPP4R3AQ6IN85 833 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 NIPA1Q7RTP0 329 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 NAP1L4Q99733 375 aaKnown RBP14.07□□□□□ -0.16
GABPB1-208ENST00000558970 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 TMEM60Q9H2L4 133 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
GABPB1-208ENST00000558970 GNEQ9Y223 722 aaKnown RBP14.07□□□□□ -0.16
GABPB1-208ENST00000558970 MYH9P35579 1960 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 NOP56O00567 594 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 GAS7O60861 476 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 DUSP11O75319 330 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 TFRCP02786 760 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 TXKP42681 527 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 ARHGAP1Q07960 439 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 NEDD9Q14511 834 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 CELF3Q5SZQ8 465 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 LRCH2Q5VUJ6 765 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 LHX8Q68G74 356 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 KCNV1Q6PIU1 500 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 ETNPPLQ8TBG4 499 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 U2AF1L4Q8WU68 220 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 AFG1LQ8WV93 481 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 SPATA33Q96N06 139 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
GABPB1-208ENST00000558970 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 CLIC4Q9Y696 253 aa14.06□□□□□ -0.16
GABPB1-208ENST00000558970 POTEFA5A3E0 1075 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 MSCO60682 206 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 FARP2O94887 1054 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 MYL3P08590 195 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 TGFB3P10600 412 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 NCLP19338 710 aaKnown RBP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 DDIT3P35638 169 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 PTGDRQ13258 359 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 SF3A1Q15459 793 aaKnown RBP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 HSDL1Q3SXM5 330 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 PPP1R13LQ8WUF5 828 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 USP28Q96RU2 1077 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 TEKT3Q9BXF9 490 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 SPC25Q9HBM1 224 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
GABPB1-208ENST00000558970 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
GABPB1-208ENST00000558970 MKI67P46013 3256 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 MAFGO15525 162 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 ADAMTS4O75173 837 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 BAG4O95429 457 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 SGPL1O95470 568 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 OR52Z1P0C646 297 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 ZNF286BP0CG31 522 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 NUCB2P80303 420 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 DNM1Q05193 864 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 LAMC2Q13753 1193 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 LRRC41Q15345 812 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 UTP14CQ5TAP6 766 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 TRMT1LQ7Z2T5 733 aaKnown RBP14.04□□□□□ -0.16
GABPB1-208ENST00000558970 HAS1Q92839 578 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 SLC5A5Q92911 643 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 KCNMB3Q9NPA1 279 aa14.04□□□□□ -0.16
GABPB1-208ENST00000558970 POTEMA6NI47 508 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 DHX15O43143 795 aaKnown RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 PSMD10O75832 226 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 CCNE2O96020 404 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 GJB1P08034 283 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 MMP3P08254 477 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 EN2P19622 333 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 TECP42680 631 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 GJA9P57773 515 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 METTL7BQ6UX53 244 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 RNF180Q86T96 592 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 DIS3LQ8TF46 1054 aaKnown RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 ZNF396Q96N95 335 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 SENP7Q9BQF6 1050 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 TBC1D22BQ9NU19 505 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 NFASCO94856 1347 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
GABPB1-208ENST00000558970 DNAH12Q6ZR08 3092 aa14.03□□□□□ -0.16
GABPB1-208ENST00000558970 ARID2Q68CP9 1835 aa14.02□□□□□ -0.16
GABPB1-208ENST00000558970 ELP1O95163 1332 aa14.02□□□□□ -0.17
GABPB1-208ENST00000558970 KBTBD13C9JR72 458 aa14.02□□□□□ -0.17
GABPB1-208ENST00000558970 CTAGE5O15320 804 aa14.02□□□□□ -0.17
GABPB1-208ENST00000558970 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms