RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 DNAJB2P25686 324 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 PSMA5P28066 241 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-208ENST00000558827 NEDD9Q14511 834 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 RPUSD2Q8IZ73 545 aaKnown RBP14.35□□□□□ -0.11
SMAD3-208ENST00000558827 GPR20Q99678 358 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 PBX4Q9BYU1 374 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 H3BRB1 525 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
SMAD3-208ENST00000558827 STK3Q13188 491 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 BFSP2Q13515 415 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 GRIN2CQ14957 1233 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 METTL7BQ6UX53 244 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 TIFAQ96CG3 184 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 NKX2-4Q9H2Z4 354 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
SMAD3-208ENST00000558827 UBIAD1Q9Y5Z9 338 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 SLC4A7Q9Y6M7 1214 aa14.34□□□□□ -0.11
SMAD3-208ENST00000558827 STAM2O75886 525 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SMIM10L2AP0DMW4 78 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SMIM10L2BP0DMW5 78 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 ARP10275 920 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 HOXD8P13378 290 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SCG2P13521 617 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 KCNA2P16389 499 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 MARK3P27448 753 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 PDIA3P30101 505 aaKnown RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 TOB2Q14106 344 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 TCTN1Q2MV58 587 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 RUFY3Q7L099 469 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SLC17A8Q8NDX2 589 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 SETD4Q9NVD3 440 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
SMAD3-208ENST00000558827 YBX2Q9Y2T7 364 aaKnown RBP14.33□□□□□ -0.12
SMAD3-208ENST00000558827 COL6A3P12111 3177 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 GSTTP1A0A1W2PQM5 241 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 DDX39AO00148 427 aaKnown RBP14.32□□□□□ -0.12
SMAD3-208ENST00000558827 TREHO43280 583 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 CKBP12277 381 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 SELPP16109 830 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 ZNF76P36508 570 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 AKAP17AQ02040 695 aaKnown RBP14.32□□□□□ -0.12
SMAD3-208ENST00000558827 MTMR1Q13613 665 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 GPNMBQ14956 572 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 PKN1Q16512 942 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 ZNF618Q5T7W0 954 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 XRRA1Q6P2D8 792 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
SMAD3-208ENST00000558827 RNPEPQ9H4A4 650 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 ZNF576Q9H609 170 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 JADE2Q9NQC1 790 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
SMAD3-208ENST00000558827 GBF1Q92538 1859 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 NBNO60934 754 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 CTSHP09668 335 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 TCF7P36402 384 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-208ENST00000558827 THPOP40225 353 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 TRIM71Q2Q1W2 868 aaKnown RBP14.31□□□□□ -0.12
SMAD3-208ENST00000558827 CCDC155Q8N6L0 562 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 GPRASP2Q96D09 838 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 OSBPL7Q9BZF2 842 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 EHMT1Q9H9B1 1298 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 CERS4Q9HA82 394 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 MSRAQ9UJ68 235 aa14.31□□□□□ -0.12
SMAD3-208ENST00000558827 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
SMAD3-208ENST00000558827 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
SMAD3-208ENST00000558827 IGBP1P78318 339 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 PTK7Q13308 1070 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 NTRK3Q16288 839 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 PPM1EQ8WY54 764 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 GLG1Q92896 1179 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 SENP7Q9BQF6 1050 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 AGXT2Q9BYV1 514 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 PRDM12Q9H4Q4 367 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 KCNH7Q9NS40 1196 aa14.3□□□□□ -0.12
SMAD3-208ENST00000558827 KAT6AQ92794 2004 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms