RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TET1Q8NFU7 2136 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 A0A0U1RQG5 324 aaPredicted RBP11.5□□□□□ -0.57
SPG11-212ENST00000558790 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CTAGE5O15320 804 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CSF2RAP15509 400 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 IGFBP4P22692 258 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CDK7P50613 346 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 SMTNP53814 917 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 GJA9P57773 515 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 PPIGQ13427 754 aaKnown RBP eCLIP11.5□□□□□ -0.57
SPG11-212ENST00000558790 TMEM240Q5SV17 173 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 RASIP1Q5U651 963 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 FAM126BQ8IXS8 530 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 PCSK9Q8NBP7 692 aaKnown RBP11.5□□□□□ -0.57
SPG11-212ENST00000558790 OSBP2Q969R2 916 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 KATNBL1Q9H079 304 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 MKNK2Q9HBH9 465 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
SPG11-212ENST00000558790 CXXC1Q9P0U4 656 aaPredicted RBP11.5□□□□□ -0.57
SPG11-212ENST00000558790 MYO15AQ9UKN7 3530 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 ZNF318Q5VUA4 2279 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 A6NJY4 79 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 M0R2N6 131 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 ARVCFO00192 962 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 PRMT3O60678 531 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 ZBED4O75132 1171 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 PRDM1O75626 825 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 ACRP10323 421 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 EPHA4P54764 986 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 NHLH1Q02575 133 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 TSHZ3Q63HK5 1081 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 GIMAP6Q6P9H5 292 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 PSRC1Q6PGN9 363 aaPredicted RBP11.49□□□□□ -0.57
SPG11-212ENST00000558790 GMCL1P1Q8NEA9 526 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 PRIMPOLQ96LW4 560 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 CLIP2Q9UDT6 1046 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
SPG11-212ENST00000558790 ASTN1O14525 1302 aa11.49□□□□□ -0.57
SPG11-212ENST00000558790 DMDP11532 3685 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.48□□□□□ -0.57
SPG11-212ENST00000558790 M0R2C6 588 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 GPAA1O43292 621 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 PTGS1P23219 599 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 TDO2P48775 406 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 OAZ1P54368 228 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 BEX3Q00994 111 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 CCDC129Q6ZRS4 1044 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 ZNF365Q70YC5 407 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 APPBP2Q92624 585 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 VTI1AQ96AJ9 217 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
SPG11-212ENST00000558790 CD320Q9NPF0 282 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 MTMR4Q9NYA4 1195 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 FEM1BQ9UK73 627 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 DDX49Q9Y6V7 483 aaKnown RBP11.48□□□□□ -0.57
SPG11-212ENST00000558790 UMODL1Q5DID0 1318 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
SPG11-212ENST00000558790 LAMA4Q16363 1823 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 TTLL8A6PVC2 850 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 TLR3O15455 904 aaKnown RBP11.47□□□□□ -0.57
SPG11-212ENST00000558790 TTLL1O95922 423 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 CD4P01730 458 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 CYP2C18P33260 490 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 NKX3-2P78367 333 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 FAM133AQ8N9E0 248 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 MKL1Q969V6 931 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
SPG11-212ENST00000558790 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 A1CFQ9NQ94 594 aaKnown RBP11.47□□□□□ -0.57
SPG11-212ENST00000558790 SCHIP1Q9P0W5 487 aaPredicted RBP11.47□□□□□ -0.57
SPG11-212ENST00000558790 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
SPG11-212ENST00000558790 SYNPO2Q9UMS6 1093 aa11.47□□□□□ -0.57
SPG11-212ENST00000558790 ZNF536O15090 1300 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 RNF113AO15541 343 aaKnown RBP11.46□□□□□ -0.57
SPG11-212ENST00000558790 BMP3P12645 472 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
SPG11-212ENST00000558790 STAT2P52630 851 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 TNFAIP2Q03169 654 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 SWI5Q1ZZU3 235 aa11.46□□□□□ -0.57
SPG11-212ENST00000558790 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms