RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 CSF2RAP15509 400 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 PSEN2P49810 448 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 AKAP17AQ02040 695 aaKnown RBP13.43□□□□□ -0.26
SHF-204ENST00000558685 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
SHF-204ENST00000558685 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
SHF-204ENST00000558685 LRIT3Q3SXY7 679 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 GDF6Q6KF10 455 aaPredicted RBP13.43□□□□□ -0.26
SHF-204ENST00000558685 SESTD1Q86VW0 696 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 SLKQ9H2G2 1235 aaPredicted RBP13.43□□□□□ -0.26
SHF-204ENST00000558685 HIPK3Q9H422 1215 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 DOCK5Q9H7D0 1870 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 KCNH7Q9NS40 1196 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 PKD2L1Q9P0L9 805 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 HDAC6Q9UBN7 1215 aa13.43□□□□□ -0.26
SHF-204ENST00000558685 FAM86B1E9PN63 330 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
SHF-204ENST00000558685 LGALS2P05162 132 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 CYP3A4P08684 503 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 FAM86B2P0C5J1 330 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 FDPSP14324 419 aaKnown RBP13.42□□□□□ -0.26
SHF-204ENST00000558685 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
SHF-204ENST00000558685 FPGSQ05932 587 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 MTMR1Q13613 665 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 MFSD10Q14728 455 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 TRIM22Q8IYM9 498 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
SHF-204ENST00000558685 ALG1Q9BT22 464 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
SHF-204ENST00000558685 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
SHF-204ENST00000558685 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 M0R2N6 131 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 MAFGO15525 162 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 DEXIO95424 95 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 GNA11P29992 359 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 CCL23P55773 120 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 SP4Q02446 784 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 ITGB3BPQ13352 177 aaPredicted RBP13.41□□□□□ -0.26
SHF-204ENST00000558685 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
SHF-204ENST00000558685 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
SHF-204ENST00000558685 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 EHMT1Q9H9B1 1298 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 AGO4Q9HCK5 861 aaKnown RBP13.41□□□□□ -0.26
SHF-204ENST00000558685 GTF2IRD1Q9UHL9 959 aa13.41□□□□□ -0.26
SHF-204ENST00000558685 H3BRB1 525 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 NOP56O00567 594 aaKnown RBP13.4□□□□□ -0.26
SHF-204ENST00000558685 SLC34A2O95436 690 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 ACRP10323 421 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 HOXC8P31273 242 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 NLRP5P59047 1200 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 PTGISQ16647 500 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 GIMAP8Q8ND71 665 aaPredicted RBP13.4□□□□□ -0.26
SHF-204ENST00000558685 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 WNT8BQ93098 351 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 PCYT2Q99447 389 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■□□ 16.1
SHF-204ENST00000558685 TUT1Q9H6E5 874 aaKnown RBP13.4□□□□□ -0.26
SHF-204ENST00000558685 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
SHF-204ENST00000558685 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 CIITAP33076 1130 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 TCF7P36402 384 aaPredicted RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 GPNMBQ14956 572 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 UTP14CQ5TAP6 766 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 RASIP1Q5U651 963 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 NIPA1Q7RTP0 329 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
SHF-204ENST00000558685 LENG9Q96B70 501 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 SCLYQ96I15 445 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 KATNAL1Q9BW62 490 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
SHF-204ENST00000558685 JAK2O60674 1132 aa13.38□□□□□ -0.27
SHF-204ENST00000558685 CDKL5O76039 1030 aa13.38□□□□□ -0.27
SHF-204ENST00000558685 CCNE2O96020 404 aa13.38□□□□□ -0.27
SHF-204ENST00000558685 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms