RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 NCK2O43639 380 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 ATP2C2O75185 946 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 ATP5HO75947 161 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 SERPING1P05155 500 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 MMEP08473 750 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 CTCFP49711 727 aaPredicted RBP17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 SH3BGRP55822 239 aaPredicted RBP17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 COPS2P61201 443 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 BNIP1Q12981 228 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 TAF11Q15544 211 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 MAN2A1Q16706 1144 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 VWA3BQ502W6 1294 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 MS4A14Q96JA4 679 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 TRAPPC9Q96Q05 1148 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 NAPBQ9H115 298 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 SMARCAL1Q9NZC9 954 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 EHD2Q9NZN4 543 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 L3MBTL1Q9Y468 752 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 ASB3Q9Y575 518 aa17.72■□□□□ 0.43
HMBOX1-212ENST00000558662 ZSCAN5CA6NGD5 496 aaPredicted RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 HIP1RO75146 1068 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 SMIM24O75264 130 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 AGTP01019 485 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 PMS1P54277 932 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 ZNF174Q15697 407 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 BTNL9Q6UXG8 535 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 ATXN2LQ8WWM7 1075 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 VCXQ9H320 206 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 CHCHD3Q9NX63 227 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 LAD1O00515 517 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 PALMO75781 387 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 SUN1O94901 812 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 OAS1P00973 400 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 GSTA2P09210 222 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 RARAP10276 462 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 MRPS25P82663 173 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 CCDC15Q0P6D6 951 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 RPS6KA1Q15418 735 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 THEMIS2Q5TEJ8 643 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 DZIP3Q86Y13 1208 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 FBF1Q8TES7 1133 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 NACAP1Q9BZK3 213 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 IRAK4Q9NWZ3 460 aa17.71■□□□□ 0.43
HMBOX1-212ENST00000558662 PGRMC1O00264 195 aaKnown RBP17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 COBLO75128 1261 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 UQCRFS1P1P0C7P4 283 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 ANXA13P27216 316 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 MSH2P43246 934 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 USP11P51784 963 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 RASSF7Q02833 373 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 PKN1Q16512 942 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 PARP6Q2NL67 630 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 C6orf118Q5T5N4 469 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 BAP1Q92560 729 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 STAMQ92783 540 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 KLHL29Q96CT2 875 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 PSMB7Q99436 277 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 POLD4Q9HCU8 107 aa17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
HMBOX1-212ENST00000558662 BCL9O00512 1426 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 SNX3O60493 162 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 GNAT1P11488 350 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 ATP6V1C1P21283 382 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 MXRA7P84157 204 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 CUL3Q13618 768 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 LAMB3Q13751 1172 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 CNNM4Q6P4Q7 775 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 ASRGL1Q7L266 308 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 TXLNGYQ9BZA5 131 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 CEP72Q9P209 647 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 DIS3Q9Y2L1 958 aaKnown RBP17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 DOCK2Q92608 1830 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
HMBOX1-212ENST00000558662 CHN1P15882 459 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 ACADSP16219 412 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 CALML3P27482 149 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 AMPD3Q01432 767 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 TSNAXIP1Q2TAA8 658 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 TBC1D25Q3MII6 688 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 TAOK1Q7L7X3 1001 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 INTS9Q9NV88 658 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.424e-7■■□□□ 12.6
HMBOX1-212ENST00000558662 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
HMBOX1-212ENST00000558662 LRRC53A6NM62 1247 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms