RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 BCAR3O75815 825 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 FGRP09769 529 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 ITIH2P19823 946 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 ETFBP38117 255 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 ETV3P41162 512 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 GPSM2P81274 684 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 CALD1Q05682 793 aaKnown RBP5.39□□□□□ -1.55
SPG11-211ENST00000558561 SF3B3Q15393 1217 aaKnown RBP5.39□□□□□ -1.55
SPG11-211ENST00000558561 ZYXQ15942 572 aaKnown RBP5.39□□□□□ -1.55
SPG11-211ENST00000558561 CPSF6Q16630 551 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-211ENST00000558561 PARP10Q53GL7 1025 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 ZMYM1Q5SVZ6 1142 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 SFRP5Q5T4F7 317 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 BEND3Q5T5X7 828 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 INTS3Q68E01 1043 aaKnown RBP5.39□□□□□ -1.55
SPG11-211ENST00000558561 TMEM192Q8IY95 271 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 PLD6Q8N2A8 252 aaKnown RBP5.39□□□□□ -1.55
SPG11-211ENST00000558561 KREMEN1Q96MU8 473 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 CRAMP1Q96RY5 1269 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 TM9SF2Q99805 663 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 NYXQ9GZU5 481 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 POLLQ9UGP5 575 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 PLAGL2Q9UPG8 496 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 SH3TC1Q8TE82 1336 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 SNED1Q8TER0 1413 aa5.39□□□□□ -1.55
SPG11-211ENST00000558561 DICER1Q9UPY3 1922 aaKnown RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 SSBP05455 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
SPG11-211ENST00000558561 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 ALDH1B1P30837 517 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 C1QTNF8P60827 252 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 FOXO4P98177 505 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 GCKRQ14397 625 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 NKPD1Q17RQ9 610 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 SLC4A10Q6U841 1118 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 UNC5AQ6ZN44 842 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 SP8Q8IXZ3 490 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 DNAAF4Q8WXU2 420 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 RPGRQ92834 1020 aaKnown RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 RBM17Q96I25 401 aaKnown RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 GREM2Q9H772 168 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 CWC25Q9NXE8 425 aaPredicted RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 NOB1Q9ULX3 412 aaKnown RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 MAPK8IP1Q9UQF2 711 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 ZNF541Q9H0D2 1346 aa5.38□□□□□ -1.55
SPG11-211ENST00000558561 POLR2AP24928 1970 aaKnown RBP5.38□□□□□ -1.55
SPG11-211ENST00000558561 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 YDJCA8MPS7 323 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 PDE8AO60658 829 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 PCCAP05165 728 aaPredicted RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 CYP7A1P22680 504 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 GUCY2CP25092 1073 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 GRIK1P39086 918 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 IARSP41252 1262 aaKnown RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 CD97P48960 835 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 RPS8P62241 208 aaKnown RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 GRAPQ13588 217 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 PPP2R5EQ16537 467 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 AOC3Q16853 763 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 MSMPQ1L6U9 139 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 HSP90AB3PQ58FF7 597 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 CDKAL1Q5VV42 579 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 ZNF746Q6NUN9 644 aaPredicted RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 UBE3BQ7Z3V4 1068 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 TTC6Q86TZ1 520 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 CCDC191Q8NCU4 936 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 GRAPLQ8TC17 118 aaPredicted RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 VWCEQ96DN2 955 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 ZNF512BQ96KM6 892 aaPredicted RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 Q96M66 194 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 SLC6A18Q96N87 628 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 MXD3Q9BW11 206 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 STK31Q9BXU1 1019 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 PUS3Q9BZE2 481 aaKnown RBP5.37□□□□□ -1.55
SPG11-211ENST00000558561 TANGO6Q9C0B7 1094 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPG11-211ENST00000558561 TNKS2Q9H2K2 1166 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 TAOK3Q9H2K8 898 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 MYH16Q9H6N6 1097 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 ATP6V0A2Q9Y487 856 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 CAPN6Q9Y6Q1 641 aa5.37□□□□□ -1.55
SPG11-211ENST00000558561 CACNA1FO60840 1977 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 GLTPD2A6NH11 291 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 FAM155AB1AL88 458 aaPredicted RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 FZD9O00144 591 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 SMAD7O15105 426 aaKnown RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 TAF5LO75529 589 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CLEC3AO75596 197 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 BBOX1O75936 387 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CEACAM5P06731 702 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CSF1RP07333 972 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 KLRK1P26718 216 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CCNFP41002 786 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 EPS15P42566 896 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 RARSP54136 660 aaKnown RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 CHMP4BP1P59074 171 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CXCL9Q07325 125 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 CCDC93Q567U6 631 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms