RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KRT40Q6A162 431 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 NIPA1Q7RTP0 329 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 KRT25Q7Z3Z0 450 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 PLA2G4DQ86XP0 818 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 OXER1Q8TDS5 423 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-205ENST00000558428 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
SMAD3-205ENST00000558428 H0YGN5 161 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 MMP1P03956 469 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 ZNF286BP0CG31 522 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 CIITAP33076 1130 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 CDK7P50613 346 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 USP11P51784 963 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 CHMP4BP1P59074 171 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-205ENST00000558428 GUCY1B3Q02153 619 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 INF2Q27J81 1249 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 PRR16Q569H4 304 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 C8orf76Q96K31 380 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 SDF4Q9BRK5 362 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 AGO4Q9HCK5 861 aaKnown RBP14.05□□□□□ -0.16
SMAD3-205ENST00000558428 GRIN2DO15399 1336 aa14.05□□□□□ -0.16
SMAD3-205ENST00000558428 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 IGLV3-22A0A075B6J6 115 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 DCDC2CA8MYV0 355 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 EDIL3O43854 480 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 HOXD8P13378 290 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-205ENST00000558428 SYN1P17600 705 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 NR5A1Q13285 461 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
SMAD3-205ENST00000558428 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
SMAD3-205ENST00000558428 SLC43A3Q8NBI5 491 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 GPR20Q99678 358 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-205ENST00000558428 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-205ENST00000558428 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
SMAD3-205ENST00000558428 BTBD18B2RXH4 712 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 TLR3O15455 904 aaKnown RBP14.03□□□□□ -0.16
SMAD3-205ENST00000558428 LGALS2P05162 132 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 CLTBP09497 229 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 ITGB3BPQ13352 177 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-205ENST00000558428 SAFBQ15424 915 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMAD3-205ENST00000558428 FAM47CQ5HY64 1035 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 UTP14CQ5TAP6 766 aaKnown RBP14.03□□□□□ -0.16
SMAD3-205ENST00000558428 NEK8Q86SG6 692 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 PPP1R13LQ8WUF5 828 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 KAT2BQ92831 832 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 PDLIM7Q9NR12 457 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 SLC9A2Q9UBY0 812 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 NFASCO94856 1347 aa14.03□□□□□ -0.16
SMAD3-205ENST00000558428 TRIP12Q14669 1992 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-205ENST00000558428 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
SMAD3-205ENST00000558428 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.17
SMAD3-205ENST00000558428 TDP2O95551 362 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 F2P00734 622 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 TCF7P36402 384 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-205ENST00000558428 PSEN2P49810 448 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 FAAP100Q0VG06 881 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 MFSD10Q14728 455 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 EARS2Q5JPH6 523 aaKnown RBP14.02□□□□□ -0.17
SMAD3-205ENST00000558428 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 SEPT1Q8WYJ6 367 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 TNFRSF25Q93038 417 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 LENG9Q96B70 501 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
SMAD3-205ENST00000558428 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-205ENST00000558428 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 FAM205CA6NFA0 338 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 MSH4O15457 936 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 B4GALT4O60513 344 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 GJB2P29033 226 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 Q4G0T1 1027 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 MOXD1Q6UVY6 613 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 TRIM50Q86XT4 487 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 FBXO18Q8NFZ0 1043 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 TMEM39AQ9NV64 488 aa14.01□□□□□ -0.17
SMAD3-205ENST00000558428 MYH9P35579 1960 aaKnown RBP14.01□□□□□ -0.17
SMAD3-205ENST00000558428 WDR81Q562E7 1941 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 LTBP2Q14767 1821 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 CYP3A7-CYP3A51PA0A087WV96 503 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 TRIM43BA6NCK2 446 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 H3BRB1 525 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 HAS3O00219 553 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms