RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 UBE2SQ16763 222 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 KRT40Q6A162 431 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 SPRED2Q7Z698 418 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 TRIM50Q86XT4 487 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 PRUNE2Q8WUY3 3088 aa17.89■□□□□ 0.45
TPM1-211ENST00000558314 LCHNA4D1U4 455 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 RSPH10B2B2RC85 870 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 SPATA31C2B4DYI2 1134 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 PARNO95453 639 aaKnown RBP17.88■□□□□ 0.45
TPM1-211ENST00000558314 RSPH10BP0C881 870 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 CALM1P0DP23 149 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 CALM2P0DP24 149 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 CALM3P0DP25 149 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 HOXD8P13378 290 aaPredicted RBP17.88■□□□□ 0.45
TPM1-211ENST00000558314 TAP1Q03518 808 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 SEMA3FQ13275 785 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 IKBKEQ14164 716 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 TRIM71Q2Q1W2 868 aaKnown RBP17.88■□□□□ 0.45
TPM1-211ENST00000558314 SYNE3Q6ZMZ3 975 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 HEATR3Q7Z4Q2 680 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 NLRX1Q86UT6 975 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 TCEANC2Q96MN5 208 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 INPP4AQ96PE3 977 aaPredicted RBP17.88■□□□□ 0.45
TPM1-211ENST00000558314 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
TPM1-211ENST00000558314 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
TPM1-211ENST00000558314 MEIS2O14770 477 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 TREHO43280 583 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 STAM2O75886 525 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 MRPS5P82675 430 aaKnown RBP17.87■□□□□ 0.45
TPM1-211ENST00000558314 METTL7BQ6UX53 244 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 ATXN2LQ8WWM7 1075 aaKnown RBP17.87■□□□□ 0.45
TPM1-211ENST00000558314 GPR20Q99678 358 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 RNPEPQ9H4A4 650 aa17.87■□□□□ 0.45
TPM1-211ENST00000558314 LGR5O75473 907 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 CXCL10P02778 98 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 ICAM3P32942 547 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 LIFRP42702 1097 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 ARHGAP4P98171 946 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 RBL2Q08999 1139 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 MBTPS1Q14703 1052 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 PCNX4Q63HM2 1172 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 SERINC5Q86VE9 423 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 MYOCDQ8IZQ8 938 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 ASB2Q96Q27 587 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 MTA3Q9BTC8 594 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
TPM1-211ENST00000558314 MTCH2Q9Y6C9 303 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 FRMPD4Q14CM0 1322 aa17.86■□□□□ 0.45
TPM1-211ENST00000558314 ABHD14A-ACY1A0A1B0GW23 586 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 SPDYE3A6NKU9 549 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 TFF2Q03403 129 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 TRAF7Q6Q0C0 670 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
TPM1-211ENST00000558314 TMTC3Q6ZXV5 915 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 FANCBQ8NB91 859 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 DBF4BQ8NFT6 615 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 ADAMTS19Q8TE59 1207 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 GDPD5Q8WTR4 605 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 CHD9Q3L8U1 2897 aa17.85■□□□□ 0.45
TPM1-211ENST00000558314 PIK3CDO00329 1044 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 GNAT1P11488 350 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 MARK3P27448 753 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 SMARCA1P28370 1054 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 GRB10Q13322 594 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 NEK1Q96PY6 1258 aa17.84■□□□□ 0.45
TPM1-211ENST00000558314 VCANP13611 3396 aa17.83■□□□□ 0.45
TPM1-211ENST00000558314 EMSYQ7Z589 1322 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 TNFRSF10AO00220 468 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 EFCAB14O75071 495 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 ATP9AO75110 1047 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 UPP2O95045 317 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 GJB5O95377 273 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 AMHP03971 560 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 TCF7P36402 384 aaPredicted RBP17.83■□□□□ 0.44
TPM1-211ENST00000558314 FGD1P98174 961 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 XRRA1Q6P2D8 792 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 CENPQQ7L2Z9 268 aaPredicted RBP17.83■□□□□ 0.44
TPM1-211ENST00000558314 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 RAD9AQ99638 391 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 DOCK5Q9H7D0 1870 aa17.83■□□□□ 0.44
TPM1-211ENST00000558314 NAPAP54920 295 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 MTMR1Q13613 665 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 GIMAP8Q8ND71 665 aaPredicted RBP17.82■□□□□ 0.44
TPM1-211ENST00000558314 SEPT8Q92599 483 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 GLG1Q92896 1179 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 UHRF1Q96T88 793 aaPredicted RBP17.82■□□□□ 0.44
TPM1-211ENST00000558314 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
TPM1-211ENST00000558314 GOLGA8AA7E2F4 631 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 GOLGA8BA8MQT2 603 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 ZBTB43O43298 467 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms