RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TGFB3P10600 412 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 SPIRE1Q08AE8 756 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 SNW1Q13573 536 aaKnown RBP18.97■□□□□ 0.63
SNX1-203ENST00000558040 CCDC183Q5T5S1 534 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 GIMAP8Q8ND71 665 aaPredicted RBP18.97■□□□□ 0.63
SNX1-203ENST00000558040 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 SNX29Q8TEQ0 813 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 USP6NLQ92738 828 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 CDK5RAP3Q96JB5 506 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 ANP32EQ9BTT0 268 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 BEGAINQ9BUH8 593 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 NFASCO94856 1347 aa18.97■□□□□ 0.63
SNX1-203ENST00000558040 PP2D1A8MPX8 630 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 POLR2DO15514 142 aaKnown RBP18.96■□□□□ 0.63
SNX1-203ENST00000558040 CDC25AP30304 524 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 KRT76Q01546 638 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 SEMA3FQ13275 785 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 ITGB3BPQ13352 177 aaPredicted RBP18.96■□□□□ 0.63
SNX1-203ENST00000558040 EEPD1Q7L9B9 569 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 IQUBQ8NA54 791 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 TRIM47Q96LD4 638 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 TIGD1Q96MW7 591 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 SENP7Q9BQF6 1050 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 TINF2Q9BSI4 451 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.96■□□□□ 0.63
SNX1-203ENST00000558040 GJD2Q9UKL4 321 aa18.96■□□□□ 0.63
SNX1-203ENST00000558040 DHX15O43143 795 aaKnown RBP18.95■□□□□ 0.62
SNX1-203ENST00000558040 CHMP2AO43633 222 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 KCNA2P16389 499 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 NEDD9Q14511 834 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 KARSQ15046 597 aaKnown RBP18.95■□□□□ 0.62
SNX1-203ENST00000558040 ARHGEF6Q15052 776 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 RRAGBQ5VZM2 374 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 OLFML2BQ68BL8 750 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 FBXO16Q8IX29 292 aaPredicted RBP18.95■□□□□ 0.62
SNX1-203ENST00000558040 PDILTQ8N807 584 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 SCFD2Q8WU76 684 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 NT5C3AQ9H0P0 336 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 UNC45AQ9H3U1 944 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 CLSTN2Q9H4D0 955 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 DISC1Q9NRI5 854 aa18.95■□□□□ 0.62
SNX1-203ENST00000558040 HOOK1Q9UJC3 728 aaKnown RBP18.95■□□□□ 0.62
SNX1-203ENST00000558040 KIAA1217Q5T5P2 1943 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 GPR25O00155 361 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CTAGE5O15320 804 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 ATP9AO75110 1047 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 XRCC5P13010 732 aaKnown RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 CYP2B6P20813 491 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 HOXD10P28358 340 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CTGFP29279 349 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 SFNP31947 248 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CCT6AP40227 531 aaKnown RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 STAT6P42226 847 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 JAK3P52333 1124 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 IRF5Q13568 498 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 TTLL4Q14679 1199 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 ZRSR1Q15695 479 aaKnown RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 ZNF746Q6NUN9 644 aaPredicted RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 KANK3Q6NY19 840 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 B3GNT9Q6UX72 402 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 MIER3Q7Z3K6 550 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CEP57L1Q8IYX8 460 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CNNM3Q8NE01 707 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 RDM1Q8NG50 284 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 NEK9Q8TD19 979 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 DHX58Q96C10 678 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 ERO1AQ96HE7 468 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 MMTAG2Q9BU76 263 aaKnown RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 PANK2Q9BZ23 570 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 ARHGAP39Q9C0H5 1083 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 TNMDQ9H2S6 317 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 ABHD16BQ9H3Z7 469 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 CUEDC2Q9H467 287 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 JPH1Q9HDC5 661 aaPredicted RBP18.94■□□□□ 0.62
SNX1-203ENST00000558040 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
SNX1-203ENST00000558040 WDR64B1ANS9 1081 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 LETM1O95202 739 aaPredicted RBP18.93■□□□□ 0.62
SNX1-203ENST00000558040 GNRH1P01148 92 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 EPHA7Q15375 998 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 KRBA2Q6ZNG9 492 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
SNX1-203ENST00000558040 KCTD17Q8N5Z5 321 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
SNX1-203ENST00000558040 MAGEF1Q9HAY2 307 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 SLC9A2Q9UBY0 812 aa18.93■□□□□ 0.62
SNX1-203ENST00000558040 A0A087X0B3 334 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 FKTNO75072 461 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 SNAI1O95863 264 aaPredicted RBP18.92■□□□□ 0.62
SNX1-203ENST00000558040 SLFN14P0C7P3 912 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 PLCG1P19174 1290 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 MUTP22033 750 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 UBA1P22314 1058 aaKnown RBP18.92■□□□□ 0.62
SNX1-203ENST00000558040 RPA1P27694 616 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 LONRF3Q496Y0 759 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 HYIQ5T013 277 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 ELOA2Q8IYF1 753 aaPredicted RBP18.92■□□□□ 0.62
SNX1-203ENST00000558040 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms