RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
CHD8-214ENST00000557727 WASF1Q92558 559 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 LENG1Q96BZ8 264 aaPredicted RBP10.32□□□□□ -0.76
CHD8-214ENST00000557727 INTS4Q96HW7 963 aaKnown RBP10.32□□□□□ -0.76
CHD8-214ENST00000557727 INPP4AQ96PE3 977 aaPredicted RBP10.32□□□□□ -0.76
CHD8-214ENST00000557727 ANO3Q9BYT9 981 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD8-214ENST00000557727 GLT8D2Q9H1C3 349 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 C6orf50Q9HD87 102 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 VTA1Q9NP79 307 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 SCN10AQ9Y5Y9 1956 aa10.32□□□□□ -0.76
CHD8-214ENST00000557727 IGLV3-22A0A075B6J6 115 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 SEPT4O43236 478 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 FOSP01100 380 aaPredicted RBP10.31□□□□□ -0.76
CHD8-214ENST00000557727 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
CHD8-214ENST00000557727 CYP3A4P08684 503 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 ITGB5P18084 799 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 GJB2P29033 226 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 NLRP5P59047 1200 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 NR5A1Q13285 461 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 EEPD1Q7L9B9 569 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 CYP2W1Q8TAV3 490 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 LENG9Q96B70 501 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 GNEQ9Y223 722 aaKnown RBP10.31□□□□□ -0.76
CHD8-214ENST00000557727 UBIAD1Q9Y5Z9 338 aa10.31□□□□□ -0.76
CHD8-214ENST00000557727 BTBD18B2RXH4 712 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 FAM86B1E9PN63 330 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 WNT7AO00755 349 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 GJB1P08034 283 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 FAM86B2P0C5J1 330 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 SMPD1P17405 629 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 DNAJB2P25686 324 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 ICAM3P32942 547 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 CIITAP33076 1130 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 ADCYAP1R1P41586 468 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 NKX3-2P78367 333 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 ARHGAP4P98171 946 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 SP2Q02086 613 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 GUCY1B3Q02153 619 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 PDE4DQ08499 809 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 STXBP2Q15833 593 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 GJC2Q5T442 439 aaPredicted RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 XRRA1Q6P2D8 792 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 C8orf76Q96K31 380 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 MBOAT7Q96N66 472 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 RNF208Q9H0X6 261 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 UPF3AQ9H1J1 476 aaKnown RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 BCAS3Q9H6U6 928 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 HMX1Q9NP08 348 aaPredicted RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 DDX20Q9UHI6 824 aaKnown RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 ZHX1Q9UKY1 873 aaPredicted RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 OGDHLQ9ULD0 1010 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 DNAH12Q6ZR08 3092 aa10.3□□□□□ -0.76
CHD8-214ENST00000557727 MYH9P35579 1960 aaKnown RBP10.3□□□□□ -0.76
CHD8-214ENST00000557727 PDE4DIPQ5VU43 2346 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 CEP290O15078 2479 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 TCHHQ07283 1943 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 MYADML2A6NDP7 307 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 SPDYE3A6NKU9 549 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 SPATA31C2B4DYI2 1134 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 ADAMTS4O75173 837 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 SGPL1O95470 568 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 MYCLP12524 364 aaPredicted RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 AKR1A1P14550 325 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 CCND2P30279 289 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 GJA8P48165 433 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 DUSP28Q4G0W2 176 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 DIS3L2Q8IYB7 885 aaKnown RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 U2AF1L4Q8WU68 220 aaKnown RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 DEFB118Q96PH6 123 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 DDX41Q9UJV9 622 aaKnown RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 TELO2Q9Y4R8 837 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
CHD8-214ENST00000557727 SYNRGQ9UMZ2 1314 aa10.29□□□□□ -0.76
CHD8-214ENST00000557727 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
CHD8-214ENST00000557727 CYP3A7-CYP3A51PA0A087WV96 503 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 MEIS1O00470 390 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 ATP9AO75110 1047 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
CHD8-214ENST00000557727 STAM2O75886 525 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 KCNA2P16389 499 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 XBP1P17861 261 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 CYP3A7P24462 503 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 U2AF2P26368 475 aaKnown RBP eCLIP10.28□□□□□ -0.763e-13■■■■□ 20.6
CHD8-214ENST00000557727 KRT2P35908 639 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 ARHGAP1Q07960 439 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 ANO1Q5XXA6 986 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 IQSEC1Q6DN90 963 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms