RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DBF4BQ8NFT6 615 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
SCFD1-224ENST00000557713 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
SCFD1-224ENST00000557713 RNPEPQ9H4A4 650 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 EMSYQ7Z589 1322 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 SGSM2O43147 1006 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 STAM2O75886 525 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 SMIM10L2AP0DMW4 78 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 SMIM10L2BP0DMW5 78 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 SEMA3FQ13275 785 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 SART3Q15020 963 aaKnown RBP18.44■□□□□ 0.54
SCFD1-224ENST00000557713 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 GDPD5Q8WTR4 605 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 ATP6V0A1Q93050 837 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 MAP3K14Q99558 947 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
SCFD1-224ENST00000557713 COL4A4P53420 1690 aaPredicted RBP18.44■□□□□ 0.54
SCFD1-224ENST00000557713 TREHO43280 583 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 HTRA4P83105 476 aaPredicted RBP18.43■□□□□ 0.54
SCFD1-224ENST00000557713 NEDD9Q14511 834 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 PLEKHG4Q58EX7 1191 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 FAM117BQ6P1L5 589 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 MB21D2Q8IYB1 491 aaPredicted RBP18.43■□□□□ 0.54
SCFD1-224ENST00000557713 GPR20Q99678 358 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 RTEL1Q9NZ71 1219 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 INSL6Q9Y581 213 aa18.43■□□□□ 0.54
SCFD1-224ENST00000557713 FIBPO43427 364 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 AMHP03971 560 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 SPZ1Q9BXG8 430 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 OSBPL7Q9BZF2 842 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 RAPGEFL1Q9UHV5 662 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 TELO2Q9Y4R8 837 aa18.42■□□□□ 0.54
SCFD1-224ENST00000557713 BAZ2BQ9UIF8 2168 aaKnown RBP18.41■□□□□ 0.54
SCFD1-224ENST00000557713 NOP56O00567 594 aaKnown RBP18.41■□□□□ 0.54
SCFD1-224ENST00000557713 CAND2O75155 1236 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 PCNX4Q63HM2 1172 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 USP17L6PQ6QN14 398 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
SCFD1-224ENST00000557713 SENP7Q9BQF6 1050 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 SETD4Q9NVD3 440 aa18.41■□□□□ 0.54
SCFD1-224ENST00000557713 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
SCFD1-224ENST00000557713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.4■□□□□ 0.54
SCFD1-224ENST00000557713 PIK3CDO00329 1044 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 MEIS2O14770 477 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 ADAM17P78536 824 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 XRRA1Q6P2D8 792 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 RRP36Q96EU6 259 aaKnown RBP18.4■□□□□ 0.54
SCFD1-224ENST00000557713 C17orf80Q9BSJ5 609 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 C1QTNF1Q9BXJ1 281 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 NCOR1O75376 2440 aa18.4■□□□□ 0.54
SCFD1-224ENST00000557713 DDAH1O94760 285 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 GNAT1P11488 350 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
SCFD1-224ENST00000557713 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 SEPT8Q92599 483 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 MYL10Q9BUA6 226 aa18.39■□□□□ 0.53
SCFD1-224ENST00000557713 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
SCFD1-224ENST00000557713 SIP14410 1827 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
SCFD1-224ENST00000557713 CTSHP09668 335 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 KIF5BP33176 963 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 FAM26DQ5JW98 314 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 UTP14CQ5TAP6 766 aaKnown RBP18.38■□□□□ 0.53
SCFD1-224ENST00000557713 NLRX1Q86UT6 975 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 TRIM50Q86XT4 487 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
SCFD1-224ENST00000557713 FBXO22Q8NEZ5 403 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 CUL5Q93034 780 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 LZTS2Q9BRK4 669 aa18.38■□□□□ 0.53
SCFD1-224ENST00000557713 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
SCFD1-224ENST00000557713 GIMAP8Q8ND71 665 aaPredicted RBP18.37■□□□□ 0.53
SCFD1-224ENST00000557713 LMBR1Q8WVP7 490 aa18.37■□□□□ 0.53
SCFD1-224ENST00000557713 EPHX3Q9H6B9 360 aa18.37■□□□□ 0.53
SCFD1-224ENST00000557713 UBE2ZQ9H832 354 aaPredicted RBP18.37■□□□□ 0.53
SCFD1-224ENST00000557713 ZNF215Q9UL58 517 aaPredicted RBP18.37■□□□□ 0.53
SCFD1-224ENST00000557713 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
SCFD1-224ENST00000557713 PRC1O43663 620 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 ATP9AO75110 1047 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 PLEKHA8P1O95397 391 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 GNAQP50148 359 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
SCFD1-224ENST00000557713 EPC2Q52LR7 807 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
SCFD1-224ENST00000557713 SAMD11Q96NU1 681 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 DOCK5Q9H7D0 1870 aa18.36■□□□□ 0.53
SCFD1-224ENST00000557713 SEC63Q9UGP8 760 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms