RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ERICH2A1L162 156 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 C17orf102A2RUQ5 167 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 RSPH10B2B2RC85 870 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 RSPH10BP0C881 870 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 SMIM10L2AP0DMW4 78 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 SMIM10L2BP0DMW5 78 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 RALYLQ86SE5 291 aaKnown RBP21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 DBF4BQ8NFT6 615 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 ATP6V0A1Q93050 837 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 RALGAPA2Q2PPJ7 1873 aa21.17■□□□□ 0.98
VIPAS39-209ENST00000556909 COL4A6Q14031 1691 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 E7EWF7 191 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 AMHP03971 560 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 SEMA3FQ13275 785 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 SART3Q15020 963 aaKnown RBP21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 GNPTABQ3T906 1256 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 PLEKHG4Q58EX7 1191 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 MYOCDQ8IZQ8 938 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 NCOA7Q8NI08 942 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 RUFY2Q8WXA3 655 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 C1QTNF1Q9BXJ1 281 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 INSL6Q9Y581 213 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 ATG2AQ2TAZ0 1938 aa21.16■□□□□ 0.98
VIPAS39-209ENST00000556909 TREHO43280 583 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 STAM2O75886 525 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 CHMLP26374 656 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 ICAM3P32942 547 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 ANTXR2P58335 489 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 METTL7BQ6UX53 244 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 CATIPQ7Z7H3 387 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 PIBF1Q8WXW3 757 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 C17orf80Q9BSJ5 609 aa21.15■□□□□ 0.98
VIPAS39-209ENST00000556909 CTSHP09668 335 aa21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 HTRA4P83105 476 aaPredicted RBP21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 CYFIP1Q7L576 1253 aa21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 TRIM50Q86XT4 487 aa21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 SP7Q8TDD2 431 aaPredicted RBP21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 GPR20Q99678 358 aa21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 RNPEPQ9H4A4 650 aa21.14■□□□□ 0.97
VIPAS39-209ENST00000556909 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 FIBPO43427 364 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 CAND2O75155 1236 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 NEDD9Q14511 834 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 MB21D2Q8IYB1 491 aaPredicted RBP21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 FBXO22Q8NEZ5 403 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 USP26Q9BXU7 913 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 OSBPL7Q9BZF2 842 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 RTEL1Q9NZ71 1219 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
VIPAS39-209ENST00000556909 IGDCC4Q8TDY8 1250 aa21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 SEPT8Q92599 483 aa21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 SPZ1Q9BXG8 430 aa21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 EPHX3Q9H6B9 360 aa21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 UBE2ZQ9H832 354 aaPredicted RBP21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 SETD4Q9NVD3 440 aa21.12■□□□□ 0.97
VIPAS39-209ENST00000556909 SGSM2O43147 1006 aa21.11■□□□□ 0.97
VIPAS39-209ENST00000556909 PCNX4Q63HM2 1172 aa21.11■□□□□ 0.97
VIPAS39-209ENST00000556909 ZNF215Q9UL58 517 aaPredicted RBP21.11■□□□□ 0.97
VIPAS39-209ENST00000556909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 GNAT1P11488 350 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 USP17L6PQ6QN14 398 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 ZNF654Q8IZM8 581 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 LMBR1Q8WVP7 490 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 MAP3K14Q99558 947 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 MYL10Q9BUA6 226 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 LY9Q9HBG7 655 aa21.1■□□□□ 0.97
VIPAS39-209ENST00000556909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 PIK3CDO00329 1044 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 MEIS2O14770 477 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 DDAH1O94760 285 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 PLA2G5P39877 138 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 ADAM17P78536 824 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 ARHGAP4P98171 946 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 SP4Q02446 784 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 EPC2Q52LR7 807 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 UTP14CQ5TAP6 766 aaKnown RBP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 CTCFLQ8NI51 663 aaPredicted RBP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 KHSRPQ92945 711 aaKnown RBP eCLIP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 CUL5Q93034 780 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 TOP1MTQ969P6 601 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 MRPL38Q96DV4 380 aaKnown RBP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 RRP36Q96EU6 259 aaKnown RBP21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 YME1L1Q96TA2 773 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 SENP7Q9BQF6 1050 aa21.09■□□□□ 0.97
VIPAS39-209ENST00000556909 KIF5BP33176 963 aa21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 LEXMQ3ZCV2 418 aa21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 XRRA1Q6P2D8 792 aa21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 SAMD11Q96NU1 681 aa21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 LRFN3Q9BTN0 628 aa21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 RBM8AQ9Y5S9 174 aaKnown RBP21.08■□□□□ 0.97
VIPAS39-209ENST00000556909 MYO7AQ13402 2215 aa21.08■□□□□ 0.96
VIPAS39-209ENST00000556909 UPP2O95045 317 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 KCNA5P22460 613 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms