RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SPATA31C2B4DYI2 1134 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 TNFRSF10AO00220 468 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 PFKFB2O60825 505 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 BMP8BP34820 402 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 SCRN1Q12765 414 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 SEMA3FQ13275 785 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 PKN1Q16512 942 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 METTL7BQ6UX53 244 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 IL17RAQ96F46 866 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 TCEAL9Q9UHQ7 104 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 UMODL1Q5DID0 1318 aa16.08■□□□□ 0.16
SLIRP-207ENST00000556831 SCN10AQ9Y5Y9 1956 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 KIAA0355O15063 1070 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 MAFGO15525 162 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 SREBF1P36956 1147 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 SP4Q02446 784 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 NFRKBQ6P4R8 1299 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
SLIRP-207ENST00000556831 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 SENP7Q9BQF6 1050 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 TRPV6Q9H1D0 765 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
SLIRP-207ENST00000556831 TMEM265A0A087WTH1 108 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 ZNF286BP0CG31 522 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 PTPN11Q06124 597 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-207ENST00000556831 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 JADE2Q9NQC1 790 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 TBX21Q9UL17 535 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 ZNF215Q9UL58 517 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-207ENST00000556831 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
SLIRP-207ENST00000556831 B4GALT4O60513 344 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 ITGB5P18084 799 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
SLIRP-207ENST00000556831 PSEN2P49810 448 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 FPGSQ05932 587 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 MFSD10Q14728 455 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 TDHQ8IZJ6 230 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 TMEM199Q8N511 208 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 CCDC155Q8N6L0 562 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 GTF3C6Q969F1 213 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 MXRA8Q9BRK3 442 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 ALG1Q9BT22 464 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 BRMS1Q9HCU9 246 aa16.05■□□□□ 0.16
SLIRP-207ENST00000556831 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
SLIRP-207ENST00000556831 ST18O60284 1047 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 F2P00734 622 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 TIMP1P01033 207 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 CD4P01730 458 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
SLIRP-207ENST00000556831 TRIM29Q14134 588 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 KIAA0753Q2KHM9 967 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 KAT2BQ92831 832 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
SLIRP-207ENST00000556831 ORC3Q9UBD5 711 aaPredicted RBP16.04■□□□□ 0.16
SLIRP-207ENST00000556831 PCDHA4Q9UN74 947 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
SLIRP-207ENST00000556831 RBM25P49756 843 aaKnown RBP16.03■□□□□ 0.16
SLIRP-207ENST00000556831 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.16
SLIRP-207ENST00000556831 RABEP1Q15276 862 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 SHHQ15465 462 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 ME3Q16798 604 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 BLIDQ8IZY5 108 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 RASGRP4Q8TDF6 673 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
SLIRP-207ENST00000556831 EYSQ5T1H1 3165 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 H3BRB1 525 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 LGALS2P05162 132 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 CYP2C9P11712 490 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 HOXD8P13378 290 aaPredicted RBP16.02■□□□□ 0.16
SLIRP-207ENST00000556831 KCNA2P16389 499 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 CYP2C18P33260 490 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 BFSP2Q13515 415 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 HIC1Q14526 733 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 PTGISQ16647 500 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 UTP14CQ5TAP6 766 aaKnown RBP16.02■□□□□ 0.16
SLIRP-207ENST00000556831 FAM109BQ6ICB4 259 aaPredicted RBP16.02■□□□□ 0.16
SLIRP-207ENST00000556831 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 RETREG2Q8NC44 543 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms