RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 INF2Q27J81 1249 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 SAPCD2Q86UD0 394 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 NPLOC4Q8TAT6 608 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 PLEKHO2Q8TD55 490 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 FRS2Q8WU20 508 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 CPA5Q8WXQ8 436 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 DPF3Q92784 378 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 SPATA25Q9BR10 227 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 FMN1Q68DA7 1419 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
HIF1A-209ENST00000556827 CFAP74Q9C0B2 1584 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 C22orf46C9J442 243 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 FAM153BP0C7A2 387 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 KCNJ6P48051 423 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
HIF1A-209ENST00000556827 IQCEQ6IPM2 695 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 LILRB2Q8N423 598 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 CXorf38Q8TB03 319 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
HIF1A-209ENST00000556827 SGSM3Q96HU1 749 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 USP40Q9NVE5 1235 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 EFCAB5A4FU69 1503 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 ZFYVE16Q7Z3T8 1539 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 PLCH2O75038 1416 aa7.5□□□□□ -1.21
HIF1A-209ENST00000556827 LMTK3Q96Q04 1460 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 ARHGEF40Q8TER5 1519 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 IQCA1LA6NCM1 817 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 PRODHO43272 600 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 MYO1BO43795 1136 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 ADCY3O60266 1144 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 CYP2C8P10632 490 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 KCNAB2Q13303 367 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 HSP90AA2PQ14568 343 aaPredicted RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 NFE2L2Q16236 605 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 FOXB2Q5VYV0 432 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 E4F1Q66K89 784 aaPredicted RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 FRMD5Q7Z6J6 570 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 LRRC47Q8N1G4 583 aaKnown RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 DIO2Q92813 273 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 MRFAP1L1Q96HT8 127 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 AARSD1Q9BTE6 412 aaKnown RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 IER2Q9BTL4 223 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 TIMM13Q9Y5L4 95 aaPredicted RBP7.49□□□□□ -1.21
HIF1A-209ENST00000556827 CLIP1P30622 1438 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 BCORL1Q5H9F3 1711 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 ATP10AO60312 1499 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 MADDQ8WXG6 1647 aa7.49□□□□□ -1.21
HIF1A-209ENST00000556827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.48□□□□□ -1.21
HIF1A-209ENST00000556827 ARNTLO00327 626 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 FPR2P25090 351 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 HOXC12P31275 282 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 GFRA1P56159 465 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 NT5DC1Q5TFE4 455 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 ETV3LQ6ZN32 361 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 TMEM145Q8NBT3 493 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 ZNF669Q96BR6 464 aaPredicted RBP7.48□□□□□ -1.21
HIF1A-209ENST00000556827 ZBTB8AQ96BR9 441 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 NOX5Q96PH1 765 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 KANSL2Q9H9L4 492 aa7.48□□□□□ -1.21
HIF1A-209ENST00000556827 TMEFF2Q9UIK5 374 aaPredicted RBP7.48□□□□□ -1.21
HIF1A-209ENST00000556827 FRMPD1Q5SYB0 1578 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 C9orf84Q5VXU9 1444 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 YEATS2Q9ULM3 1422 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 SH3D21A4FU49 640 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 DLX3O60479 287 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 CELA3BP08861 270 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 MROH9Q5TGP6 573 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 PPIL6Q8IXY8 311 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 KREMEN2Q8NCW0 462 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 SEC14L1Q92503 715 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 TRMT2BQ96GJ1 504 aaKnown RBP7.47□□□□□ -1.21
HIF1A-209ENST00000556827 NTMQ9P121 344 aa7.47□□□□□ -1.21
HIF1A-209ENST00000556827 TRAV20A0A0B4J274 112 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 BLACEA4D250 179 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 CPP00450 1065 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 SCG5P05408 212 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 C8BP07358 591 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 PABPC1P11940 636 aaKnown RBP7.46□□□□□ -1.22
HIF1A-209ENST00000556827 BCL6P41182 706 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 GTF2A2P52657 109 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 SMAD4Q13485 552 aaKnown RBP7.46□□□□□ -1.22
HIF1A-209ENST00000556827 FAM209AQ5JX71 171 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 CEP68Q76N32 757 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 CCDC103Q8IW40 242 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 CARFQ8N187 725 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 AFAP1Q8N556 730 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
HIF1A-209ENST00000556827 OSBP2Q969R2 916 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 C1orf159Q96HA4 380 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 PALD1Q9ULE6 856 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 COA3Q9Y2R0 106 aaPredicted RBP7.46□□□□□ -1.22
HIF1A-209ENST00000556827 ZMYM4Q5VZL5 1548 aa7.46□□□□□ -1.22
HIF1A-209ENST00000556827 ZNF518AQ6AHZ1 1483 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 SGSM2O43147 1006 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms