RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	PCNX4	Q63HM2	1172 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	CXCL17	Q6UXB2	119 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	TLK2	Q86UE8	772 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	REXO1	Q8N1G1	1221 aa	Known RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	ZNF713	Q8N859	430 aa	Predicted RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	ARRDC4	Q8NCT1	418 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	OR6J1	Q8NGC5	347 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	SCFD2	Q8WU76	684 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	AFG1L	Q8WV93	481 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	CRYGN	Q8WXF5	182 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	GJA10	Q969M2	543 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	PHF20	Q9BVI0	1012 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	ANO3	Q9BYT9	981 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	UPF3A	Q9H1J1	476 aa	Known RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	RBM27	Q9P2N5	1060 aa	Known RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	PCDHA4	Q9UN74	947 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	UBIAD1	Q9Y5Z9	338 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	MRVI1	Q9Y6F6	885 aa		10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	MKI67	P46013	3256 aa	Known RBP	10.08	□□□□□ -0.8
PRKCH-222	ENST00000556778	STK36	Q9NRP7	1315 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	SMCHD1	A6NHR9	2005 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	DOCK3	Q8IZD9	2030 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778		B4DLN1	442 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	ASGR1	P07306	291 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	GNA11	P29992	359 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	ACLY	P53396	1101 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	MLLT1	Q03111	559 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	NR5A1	Q13285	461 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	TTLL4	Q14679	1199 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	FSCN1	Q16658	493 aa	Known RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	LRRC26	Q2I0M4	334 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	NECAB2	Q7Z6G3	386 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	RNF180	Q86T96	592 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	BLID	Q8IZY5	108 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	ANKLE1	Q8NAG6	615 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	INPP4A	Q96PE3	977 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	MPHOSPH6	Q99547	160 aa	Known RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	AP5M1	Q9H0R1	490 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	SH3GLB2	Q9NR46	395 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778	GRIN2D	O15399	1336 aa		10.07	□□□□□ -0.8
PRKCH-222	ENST00000556778		A0A1W2PQ45	241 aa	Predicted RBP	10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778		A0A1W2PQY0	241 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	BTBD18	B2RXH4	712 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	GGPS1	O95749	300 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	FOS	P01100	380 aa	Predicted RBP	10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	MYL3	P08590	195 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	UBA1	P22314	1058 aa	Known RBP	10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	SREBF1	P36956	1147 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	NKX3-2	P78367	333 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	ARHGAP4	P98171	946 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	SP4	Q02446	784 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	HSDL1	Q3SXM5	330 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	MYSM1	Q5VVJ2	828 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	KRT40	Q6A162	431 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	SLC39A5	Q6ZMH5	540 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	CYFIP1	Q7L576	1253 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	CCDC148	Q8NFR7	591 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	TBCK	Q8TEA7	893 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	DPF3	Q92784	378 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	MXRA8	Q9BRK3	442 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	LLPH	Q9BRT6	129 aa	Known RBP	10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	JADE2	Q9NQC1	790 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	KCNH7	Q9NS40	1196 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	PHF24	Q9UPV7	400 aa		10.06	□□□□□ -0.8
PRKCH-222	ENST00000556778	IGLV3-22	A0A075B6J6	115 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778		A6NJR5	290 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	KBTBD13	C9JR72	458 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	MEIS1	O00470	390 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	WNT7A	O00755	349 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	TDP2	O95551	362 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	GH1	P01241	217 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	ICAM3	P32942	547 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	ZNF76	P36508	570 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	CHMP4BP1	P59074	171 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	ITGB3BP	Q13352	177 aa	Predicted RBP	10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	AP3B2	Q13367	1082 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	MTMR1	Q13613	665 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	INF2	Q27J81	1249 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	CEP55	Q53EZ4	464 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	CELF3	Q5SZQ8	465 aa	Known RBP	10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	PIK3AP1	Q6ZUJ8	805 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	DHX37	Q8IY37	1157 aa	Known RBP	10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	DAGLB	Q8NCG7	672 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	TNFRSF25	Q93038	417 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	VTI1A	Q96AJ9	217 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778		Q9Y3F1	56 aa		10.05	□□□□□ -0.8
PRKCH-222	ENST00000556778	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	KIF28P	B7ZC32	967 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	FIBP	O43427	364 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	MMP1	P03956	469 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	MMP3	P08254	477 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	CYP3A4	P08684	503 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	KCNA2	P16389	499 aa		10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	CST5	P28325	142 aa	Predicted RBP	10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	PURA	Q00577	322 aa	Known RBP	10.04	□□□□□ -0.8
PRKCH-222	ENST00000556778	TRIM60	Q495X7	471 aa		10.04	□□□□□ -0.8

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