RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ZNF215Q9UL58 517 aaPredicted RBP12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 PTPRSQ13332 1948 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 ZBTB43O43298 467 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 TLL1O43897 1013 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 SMIM10L2AP0DMW4 78 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 SMIM10L2BP0DMW5 78 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 GNAT1P11488 350 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 ICAM3P32942 547 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 NAPAP54920 295 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 IKBKEQ14164 716 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 RTN1Q16799 776 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 ADCK5Q3MIX3 580 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 HERC6Q8IVU3 1022 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 USP38Q8NB14 1042 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 GPR20Q99678 358 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
SPTLC2-205ENST00000556607 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 RFXAPO00287 272 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 TREHO43280 583 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 NBNO60934 754 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 HOXD8P13378 290 aaPredicted RBP12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 MTMR1Q13613 665 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 HIC1Q14526 733 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 FAM117BQ6P1L5 589 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 APOA5Q6Q788 366 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 TMCO2Q7Z6W1 182 aaPredicted RBP12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 GIMAP8Q8ND71 665 aaPredicted RBP12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 ARNTL2Q8WYA1 636 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 WNT8BQ93098 351 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 RNPEPQ9H4A4 650 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 PRDM6Q9NQX0 595 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
SPTLC2-205ENST00000556607 EYSQ5T1H1 3165 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 ABHD14A-ACY1A0A1B0GW23 586 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 CTSHP09668 335 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 ARHGAP4P98171 946 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 RBL2Q08999 1139 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 GPNMBQ14956 572 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-205ENST00000556607 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 EFCAB14O75071 495 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 ATP9AO75110 1047 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 LGR5O75473 907 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 CXCL10P02778 98 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 CPA1P15085 419 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 MARK3P27448 753 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 ADCY7P51828 1080 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 DEFB103AP81534 67 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 GLG1Q92896 1179 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 TELO2Q9Y4R8 837 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
SPTLC2-205ENST00000556607 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 AMHP03971 560 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 ITGB5P18084 799 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 ZNF76P36508 570 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 APOBRQ0VD83 1088 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 TCTN1Q2MV58 587 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 Q6ZUG5 572 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 MYOCDQ8IZQ8 938 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms