RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 MYL10Q9BUA6 226 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 SORBS3O60504 671 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 RGS20O76081 388 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 F2P00734 622 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 CXCL10P02778 98 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 CKBP12277 381 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 KCNJ6P48051 423 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 PSEN2P49810 448 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 GNPTABQ3T906 1256 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 ALG1Q9BT22 464 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 KATNAL1Q9BW62 490 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 FRMPD4Q14CM0 1322 aa11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-224ENST00000556226 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 HAS3O00219 553 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 MEIS2O14770 477 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 ICAM3P32942 547 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 PLA2G5P39877 138 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 MFSD10Q14728 455 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 CNKSR3Q6P9H4 555 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 TMTC3Q6ZXV5 915 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 KCNB2Q92953 911 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 HLA-CQ95604 372 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 LRRC2Q9BYS8 371 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 PSTPIP2Q9H939 334 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 COG5Q9UP83 839 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 MYH7BA7E2Y1 1941 aa11.26□□□□□ -0.61
HNRNPC-224ENST00000556226 SIP14410 1827 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 PIEZO1Q92508 2521 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 GJB5O95377 273 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 GGPS1O95749 300 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 HOXD8P13378 290 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 RXRAP19793 462 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 SP2Q02086 613 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 NEDD9Q14511 834 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 KIAA0753Q2KHM9 967 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 HSDL1Q3SXM5 330 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 FAM117BQ6P1L5 589 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 C7orf31Q8N865 590 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.619e-6■■□□□ 14.5
HNRNPC-224ENST00000556226 ZFP91Q96JP5 570 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 SPATA33Q96N06 139 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 SUGCTQ9HAC7 445 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 CD320Q9NPF0 282 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
HNRNPC-224ENST00000556226 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 ZBTB43O43298 467 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 FIBPO43427 364 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 UBA1P22314 1058 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 HSPA4P34932 840 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 RCAN1P53805 252 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 ERVK-21P61565 698 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 PTK7Q13308 1070 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 ADCK5Q3MIX3 580 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 USP17L6PQ6QN14 398 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.24□□□□□ -0.616e-7■■■■□ 21.4
HNRNPC-224ENST00000556226 NLRX1Q86UT6 975 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 MICU3Q86XE3 530 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 GIMAP8Q8ND71 665 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 RAD9AQ99638 391 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 SENP7Q9BQF6 1050 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 C1QTNF1Q9BXJ1 281 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 BCAS3Q9H6U6 928 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 MICAL3Q7RTP6 2002 aa11.24□□□□□ -0.61
HNRNPC-224ENST00000556226 MAFGO15525 162 aa11.23□□□□□ -0.61
HNRNPC-224ENST00000556226 REC8O95072 547 aa11.23□□□□□ -0.61
HNRNPC-224ENST00000556226 NEFLP07196 543 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms