RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 STAT3P40763 770 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 USP5P45974 858 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 CCL23P55773 120 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 GJA9P57773 515 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 PSMA6P60900 246 aaKnown RBP8.32□□□□□ -1.08
ATXN3-236ENST00000556220 CLDN10P78369 228 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 GABPAQ06546 454 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 MAMDC4Q6UXC1 1216 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 GJD3Q8N144 294 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 SLC43A3Q8NBI5 491 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 VWCEQ96DN2 955 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 UIMC1Q96RL1 719 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 UPF3AQ9H1J1 476 aaKnown RBP8.32□□□□□ -1.08
ATXN3-236ENST00000556220 CERS4Q9HA82 394 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 TRANK1O15050 2925 aa8.32□□□□□ -1.08
ATXN3-236ENST00000556220 UMODL1Q5DID0 1318 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ZNF236Q9UL36 1845 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ELOA3CA0A087WX78 387 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 PALM3A6NDB9 673 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ELOA3DA6NLF2 546 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 CA3P07451 260 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ALADP13716 330 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ALAS2P22557 587 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 CYP7A1P22680 504 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 COPB2P35606 906 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 NKX3-2P78367 333 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ACVR2BQ13705 512 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ELOA3BQ3SY89 546 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 TBCELQ5QJ74 424 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ELOA3Q8NG57 546 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 UCN2Q96RP3 112 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-236ENST00000556220 KIAA1024Q9UPX6 916 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
ATXN3-236ENST00000556220 C1QTNF9BB2RNN3 333 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-236ENST00000556220 CTAGE5O15320 804 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 SIN3BO75182 1162 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 CABYRO75952 493 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-236ENST00000556220 ZAP70P43403 619 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-236ENST00000556220 GRB10Q13322 594 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 MTX1Q13505 466 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 TTLL4Q14679 1199 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 CCDC158Q5M9N0 1113 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 SYT9Q86SS6 491 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 SIAH1Q8IUQ4 282 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 FAM178BQ8IXR5 827 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 MIGA1Q8NAN2 632 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 ARNTL2Q8WYA1 636 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 MEIS3Q99687 375 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 SEZ6LQ9BYH1 1024 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 VCPKMTQ9H867 229 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 PIH1D3Q9NQM4 214 aaKnown RBP8.3□□□□□ -1.08
ATXN3-236ENST00000556220 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
ATXN3-236ENST00000556220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 VWA5AO00534 786 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 WDR46O15213 610 aaKnown RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ADCY6O43306 1168 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 LPXNO60711 386 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 PFKMP08237 780 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 TAP1Q03518 808 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 CCDC144BQ3MJ40 725 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ALDH1L2Q3SY69 923 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 TMEM179Q6ZVK1 233 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 CD163Q86VB7 1156 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 SIX5Q8N196 739 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 PHOSPHO2Q8TCD6 241 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 RHPN1Q8TCX5 695 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 DDX11Q96FC9 970 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 SCLYQ96I15 445 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ZNF512BQ96KM6 892 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 MDFIQ99750 246 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 TRPV6Q9H1D0 765 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 WNT8AQ9H1J5 351 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ABHD16BQ9H3Z7 469 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 GPR108Q9NPR9 543 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 ZNF214Q9UL59 606 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
ATXN3-236ENST00000556220 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
ATXN3-236ENST00000556220 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 CFAP54Q96N23 3096 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 ADARB2-AS1A8MUL3 147 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 KIF28PB7ZC32 967 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 B4GALT4O60513 344 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 BEX3Q00994 111 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms