RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 ATXN2LQ8WWM7 1075 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-216ENST00000556175 TSPYL2Q9H2G4 693 aaPredicted RBP24.84■■□□□ 1.57
SDR39U1-216ENST00000556175 PSTPIP2Q9H939 334 aa24.84■■□□□ 1.57
SDR39U1-216ENST00000556175 ZNF215Q9UL58 517 aaPredicted RBP24.84■■□□□ 1.57
SDR39U1-216ENST00000556175 SPTBN5Q9NRC6 3674 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-216ENST00000556175 TLL1O43897 1013 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 ZNF618Q5T7W0 954 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 TMTC3Q6ZXV5 915 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 FANCBQ8NB91 859 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 CDHR1Q96JP9 859 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 GPR20Q99678 358 aa24.83■■□□□ 1.57
SDR39U1-216ENST00000556175 GTPBP6O43824 516 aaPredicted RBP24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 SMIM10L2AP0DMW4 78 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 SMIM10L2BP0DMW5 78 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 GNAT1P11488 350 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 HOXC8P31273 242 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 ZNF200P98182 395 aaPredicted RBP24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 SEMA3FQ13275 785 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 IKBKEQ14164 716 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 CCDC85BQ15834 202 aaPredicted RBP24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 MICU3Q86XE3 530 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 CMTR1Q8N1G2 835 aaKnown RBP24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 ATP6V0A1Q93050 837 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 ZBED2Q9BTP6 218 aa24.82■■□□□ 1.56
SDR39U1-216ENST00000556175 CAND2O75155 1236 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 THPOP40225 353 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 TRAF7Q6Q0C0 670 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 WNT8BQ93098 351 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 GPRASP2Q96D09 838 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 NEK1Q96PY6 1258 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 LRRC2Q9BYS8 371 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 RBM28Q9NW13 759 aaKnown RBP24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 TTC28Q96AY4 2481 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 TRANK1O15050 2925 aa24.81■■□□□ 1.56
SDR39U1-216ENST00000556175 SPDYE3A6NKU9 549 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 RSPH10B2B2RC85 870 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 LGR5O75473 907 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 RSPH10BP0C881 870 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 TAP1Q03518 808 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 HIC1Q14526 733 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 TEX2Q8IWB9 1127 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 BCAS3Q9H6U6 928 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 EHMT1Q9H9B1 1298 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 PRDM6Q9NQX0 595 aa24.8■■□□□ 1.56
SDR39U1-216ENST00000556175 POU3F3P20264 500 aaPredicted RBP24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 COL9A3Q14050 684 aaPredicted RBP24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 RAB11FIP4Q86YS3 637 aa24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 CCDC82Q8N4S0 544 aa24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 ARNTL2Q8WYA1 636 aa24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 RNPEPQ9H4A4 650 aa24.79■■□□□ 1.56
SDR39U1-216ENST00000556175 CDC45O75419 566 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 DEFB103AP81534 67 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 KRT32Q14532 448 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 MBTPS1Q14703 1052 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 HEATR3Q7Z4Q2 680 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 MICALL1Q8N3F8 863 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 CERS4Q9HA82 394 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 PTPRSQ13332 1948 aa24.78■■□□□ 1.56
SDR39U1-216ENST00000556175 TREHO43280 583 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 GJB5O95377 273 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 MRPS5P82675 430 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 SP4Q02446 784 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 UTP14CQ5TAP6 766 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 APOA5Q6Q788 366 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 DHX32Q7L7V1 743 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 ASB2Q96Q27 587 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 RAD9AQ99638 391 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 DOCK5Q9H7D0 1870 aa24.77■■□□□ 1.56
SDR39U1-216ENST00000556175 hCG_1642624A0A1W2PR95 340 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 MAFGO15525 162 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 MTMR1Q13613 665 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 UBE2SQ16763 222 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 TSGA10IPQ3SY00 556 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 PPP1R18Q6NYC8 613 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 IL27Q8NEV9 243 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 MTCH2Q9Y6C9 303 aa24.76■■□□□ 1.55
SDR39U1-216ENST00000556175 hCG_1984214I3L0E3 225 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 ZBTB43O43298 467 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 AMHP03971 560 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 HMGB1P09429 215 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 KCNA2P16389 499 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 EXOSC10Q01780 885 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 RTN1Q16799 776 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 TRIM50Q86XT4 487 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 ZNF713Q8N859 430 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 SETD4Q9NVD3 440 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 PCDHA6Q9UN73 950 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 PCDHA8Q9Y5H6 950 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 UBIAD1Q9Y5Z9 338 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 CNTNAP5Q8WYK1 1306 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 NRCAMQ92823 1304 aa24.75■■□□□ 1.55
SDR39U1-216ENST00000556175 RFXAPO00287 272 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 ARHGEF15O94989 841 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 ITGB5P18084 799 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 TCF7P36402 384 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 ARHGAP4P98171 946 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 TCTN1Q2MV58 587 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 TMCO2Q7Z6W1 182 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 DBF4BQ8NFT6 615 aa24.74■■□□□ 1.55
SDR39U1-216ENST00000556175 SEPT8Q92599 483 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms