RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 TTLL4Q14679 1199 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
APEX1-212ENST00000556054 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 SHC4Q6S5L8 630 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
APEX1-212ENST00000556054 CLIC6Q96NY7 704 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.25
APEX1-212ENST00000556054 HPSEQ9Y251 543 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 WDR81Q562E7 1941 aa13.52□□□□□ -0.25
APEX1-212ENST00000556054 ATP9AO75110 1047 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
APEX1-212ENST00000556054 SFNP31947 248 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 TECP42680 631 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 CAP1Q01518 475 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 PRKCZQ05513 592 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 GRIN1Q05586 938 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
APEX1-212ENST00000556054 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
APEX1-212ENST00000556054 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
APEX1-212ENST00000556054 TXLNAP40222 546 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 UBA7P41226 1012 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 JAK3P52333 1124 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 EPHA7Q15375 998 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 HYIQ5T013 277 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 SEPT14Q6ZU15 432 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 ENGASEQ8NFI3 743 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 EMID1Q96A84 441 aaPredicted RBP13.5□□□□□ -0.25
APEX1-212ENST00000556054 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
APEX1-212ENST00000556054 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
APEX1-212ENST00000556054 FLRT1Q9NZU1 646 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 TCEAL9Q9UHQ7 104 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 Q9Y3F1 56 aa13.5□□□□□ -0.25
APEX1-212ENST00000556054 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 ATG7O95352 703 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 ZNF865P0CJ78 1059 aaPredicted RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 RPA1P27694 616 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 SP2Q02086 613 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 KLHL40Q2TBA0 621 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 CELF3Q5SZQ8 465 aaKnown RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 FBXO16Q8IX29 292 aaPredicted RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 TIGD1Q96MW7 591 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 HSD17B14Q9BPX1 270 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 JPH1Q9HDC5 661 aaPredicted RBP13.49□□□□□ -0.25
APEX1-212ENST00000556054 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 SLC9A2Q9UBY0 812 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
APEX1-212ENST00000556054 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 KDM3AQ9Y4C1 1321 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 FARP2O94887 1054 aaPredicted RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 PFKFB1P16118 471 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 CCL14Q16627 93 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 CABP7Q86V35 215 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 FMR1NBQ8N0W7 255 aaPredicted RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 TRIB2Q92519 343 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 EPSTI1Q96J88 318 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
APEX1-212ENST00000556054 DDX49Q9Y6V7 483 aaKnown RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 MYH9P35579 1960 aaKnown RBP13.48□□□□□ -0.25
APEX1-212ENST00000556054 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 POTEMA6NI47 508 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 EML1O00423 815 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 ADCY3O60266 1144 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 DKC1O60832 514 aaKnown RBP eCLIP13.47□□□□□ -0.25
APEX1-212ENST00000556054 LYPLA2O95372 231 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 ARIH2O95376 493 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 GH1P01241 217 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 HMGCRP04035 888 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 P4HBP07237 508 aaKnown RBP13.47□□□□□ -0.25
APEX1-212ENST00000556054 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
APEX1-212ENST00000556054 CYBAP13498 195 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 CYP2C19P33261 490 aa13.47□□□□□ -0.25
APEX1-212ENST00000556054 SYKP43405 635 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms