RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 NFASCO94856 1347 aa26.03■■□□□ 1.76
CDKN3-208ENST00000555837 CCDC194A0A1B0GVG4 234 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 F2P00734 622 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 PTGS1P23219 599 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 CCDC155Q8N6L0 562 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 SEPT1Q8WYJ6 367 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 PGBD1Q96JS3 809 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 KIF2CQ99661 725 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 GDF15Q99988 308 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 JPH1Q9HDC5 661 aaPredicted RBP26.02■■□□□ 1.76
CDKN3-208ENST00000555837 TBC1D22BQ9NU19 505 aa26.02■■□□□ 1.76
CDKN3-208ENST00000555837 CD4P01730 458 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 GNAT1P11488 350 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 KCNA2P16389 499 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 MAGEA10P43363 369 aaPredicted RBP26.01■■□□□ 1.75
CDKN3-208ENST00000555837 PSMC6P62333 389 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 SEMA3FQ13275 785 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 NONOQ15233 471 aaKnown RBP eCLIP26.01■■□□□ 1.75
CDKN3-208ENST00000555837 PLA2G4DQ86XP0 818 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 PHF20Q9BVI0 1012 aa26.01■■□□□ 1.75
CDKN3-208ENST00000555837 UBE2OQ9C0C9 1292 aaKnown RBP26.01■■□□□ 1.75
CDKN3-208ENST00000555837 MYH7BA7E2Y1 1941 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 H3BRB1 525 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 TIMP1P01033 207 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 CIITAP33076 1130 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 PSEN2P49810 448 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 CHMP4BP1P59074 171 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 MFSD10Q14728 455 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 SAFBQ15424 915 aaKnown RBP eCLIP26■■□□□ 1.75
CDKN3-208ENST00000555837 TMEM199Q8N511 208 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 NSUN7Q8NE18 718 aaKnown RBP26■■□□□ 1.75
CDKN3-208ENST00000555837 GPR20Q99678 358 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 BACH2Q9BYV9 841 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 TUT1Q9H6E5 874 aaKnown RBP26■■□□□ 1.75
CDKN3-208ENST00000555837 SLC9A2Q9UBY0 812 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 TBX21Q9UL17 535 aa26■■□□□ 1.75
CDKN3-208ENST00000555837 GRIN2DO15399 1336 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 CTDNEP1O95476 244 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 KIAA0753Q2KHM9 967 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 FAM184AQ8NB25 1140 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 CRYGNQ8WXF5 182 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 AZI2Q9H6S1 392 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 COLQQ9Y215 455 aaPredicted RBP25.99■■□□□ 1.75
CDKN3-208ENST00000555837 CEP290O15078 2479 aa25.99■■□□□ 1.75
CDKN3-208ENST00000555837 BFSP2Q13515 415 aa25.98■■□□□ 1.75
CDKN3-208ENST00000555837 MOXD1Q6UVY6 613 aa25.98■■□□□ 1.75
CDKN3-208ENST00000555837 ZNF577Q9BSK1 485 aa25.98■■□□□ 1.75
CDKN3-208ENST00000555837 SMARCAD1Q9H4L7 1026 aa25.98■■□□□ 1.75
CDKN3-208ENST00000555837 AGO4Q9HCK5 861 aaKnown RBP25.98■■□□□ 1.75
CDKN3-208ENST00000555837 SCN10AQ9Y5Y9 1956 aa25.98■■□□□ 1.75
CDKN3-208ENST00000555837 TRIM43BA6NCK2 446 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 IPO5O00410 1097 aaKnown RBP25.97■■□□□ 1.75
CDKN3-208ENST00000555837 B4GALT4O60513 344 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 LARGE1O95461 756 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 LGALS2P05162 132 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 KRT2P35908 639 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 MDM2Q00987 491 aaPredicted RBP25.97■■□□□ 1.75
CDKN3-208ENST00000555837 FPGSQ05932 587 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 MFSD5Q6N075 450 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 CCDC83Q8IWF9 413 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 RETREG2Q8NC44 543 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 TBCKQ8TEA7 893 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 TRIM43Q96BQ3 446 aaPredicted RBP25.97■■□□□ 1.75
CDKN3-208ENST00000555837 HIPK3Q9H422 1215 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 ERAP1Q9NZ08 941 aa25.97■■□□□ 1.75
CDKN3-208ENST00000555837 DNAH12Q6ZR08 3092 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 HAS3O00219 553 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 SORBS3O60504 671 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 ATP9AO75110 1047 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 ZNF286BP0CG31 522 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 GCFC2P16383 781 aaKnown RBP25.96■■□□□ 1.75
CDKN3-208ENST00000555837 TCF7P36402 384 aaPredicted RBP25.96■■□□□ 1.75
CDKN3-208ENST00000555837 PPIGQ13427 754 aaKnown RBP eCLIP25.96■■□□□ 1.75
CDKN3-208ENST00000555837 RASGRP4Q8TDF6 673 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 KAT2BQ92831 832 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 GLG1Q92896 1179 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 C16orf70Q9BSU1 422 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 GTF2IRD1Q9UHL9 959 aa25.96■■□□□ 1.75
CDKN3-208ENST00000555837 FAM86B1E9PN63 330 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 PARNO95453 639 aaKnown RBP25.95■■□□□ 1.74
CDKN3-208ENST00000555837 FAM86B2P0C5J1 330 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 SLC26A2P50443 739 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 SP4Q02446 784 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 PTGISQ16647 500 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 PRR16Q569H4 304 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 SH3RF1Q7Z6J0 888 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 CAGE1Q8TC20 777 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 BADQ92934 168 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 AIFM3Q96NN9 605 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 TRPV6Q9H1D0 765 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 PKD2L1Q9P0L9 805 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 KCNJ14Q9UNX9 436 aa25.95■■□□□ 1.74
CDKN3-208ENST00000555837 M0R2N6 131 aa25.94■■□□□ 1.74
CDKN3-208ENST00000555837 PITPNM1O00562 1244 aa25.94■■□□□ 1.74
CDKN3-208ENST00000555837 ARP10275 920 aa25.94■■□□□ 1.74
CDKN3-208ENST00000555837 KRT76Q01546 638 aa25.94■■□□□ 1.74
CDKN3-208ENST00000555837 SMAP1Q8IYB5 467 aaPredicted RBP25.94■■□□□ 1.74
CDKN3-208ENST00000555837 RPUSD2Q8IZ73 545 aaKnown RBP25.94■■□□□ 1.74
CDKN3-208ENST00000555837 TDHQ8IZJ6 230 aa25.94■■□□□ 1.74
CDKN3-208ENST00000555837 CYP2W1Q8TAV3 490 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms