RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 H3BRB1 525 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 PARNO95453 639 aaKnown RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 CKBP12277 381 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 CPA1P15085 419 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 HSPA4P34932 840 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 RABGGTBP53611 331 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 RCAN1P53805 252 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 ZNF200P98182 395 aaPredicted RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 FUT2Q10981 343 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 GPRASP2Q96D09 838 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 GPR20Q99678 358 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 TUT1Q9H6E5 874 aaKnown RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 NAP1L2Q9ULW6 460 aaPredicted RBP15.85■□□□□ 0.13
PCNX4-209ENST00000555569 PCDHA6Q9UN73 950 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 PCDHA8Q9Y5H6 950 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
PCNX4-209ENST00000555569 REC8O95072 547 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 CDC27P30260 824 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 NAPAP54920 295 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 HIC1Q14526 733 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 TRIM71Q2Q1W2 868 aaKnown RBP15.84■□□□□ 0.13
PCNX4-209ENST00000555569 PPP1R18Q6NYC8 613 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 BLOC1S2Q6QNY1 142 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 GIMAP8Q8ND71 665 aaPredicted RBP15.84■□□□□ 0.13
PCNX4-209ENST00000555569 CDHR1Q96JP9 859 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 SLC28A3Q9HAS3 691 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
PCNX4-209ENST00000555569 PCDHA11Q9Y5I1 949 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 UBIAD1Q9Y5Z9 338 aa15.84■□□□□ 0.13
PCNX4-209ENST00000555569 V9GY48 417 aaPredicted RBP15.84■□□□□ 0.13
PCNX4-209ENST00000555569 C17orf102A2RUQ5 167 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 hCG_1984214I3L0E3 225 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 SMIM10L2AP0DMW4 78 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 SMIM10L2BP0DMW5 78 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 ITGB5P18084 799 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 SP4Q02446 784 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 APOBRQ0VD83 1088 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 GPNMBQ14956 572 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 UTP14CQ5TAP6 766 aaKnown RBP15.83■□□□□ 0.12
PCNX4-209ENST00000555569 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 Q6ZUG5 572 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 ZNF713Q8N859 430 aaPredicted RBP15.83■□□□□ 0.12
PCNX4-209ENST00000555569 WNT8BQ93098 351 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 SLC9A7Q96T83 725 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 GAS2L1Q99501 681 aaPredicted RBP15.83■□□□□ 0.12
PCNX4-209ENST00000555569 PRDM12Q9H4Q4 367 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 RIC8AQ9NPQ8 531 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 TELO2Q9Y4R8 837 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 PTPRSQ13332 1948 aa15.83■□□□□ 0.12
PCNX4-209ENST00000555569 STXBP3O00186 592 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 NBNO60934 754 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 ATP9AO75110 1047 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 BAIAP3O94812 1187 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 CXCL10P02778 98 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 MYOGP15173 224 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 KCNA2P16389 499 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 HOXC8P31273 242 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 METAP2P50579 478 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCNX4-209ENST00000555569 ADCY7P51828 1080 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 ZNF618Q5T7W0 954 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 CNKSR3Q6P9H4 555 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 TRIM50Q86XT4 487 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 TEX2Q8IWB9 1127 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCNX4-209ENST00000555569 PHOSPHO2Q8TCD6 241 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 BRF1Q92994 677 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 ATP6V0A1Q93050 837 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 JADE2Q9NQC1 790 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 ZNF215Q9UL58 517 aaPredicted RBP15.82■□□□□ 0.12
PCNX4-209ENST00000555569 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
PCNX4-209ENST00000555569 CCDC196A0A1B0GTZ2 297 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 FOSP01100 380 aaPredicted RBP15.81■□□□□ 0.12
PCNX4-209ENST00000555569 RPS6KB1P23443 525 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
PCNX4-209ENST00000555569 MTMR1Q13613 665 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 CHD9Q3L8U1 2897 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 PPP2R2DQ66LE6 453 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 TRAF7Q6Q0C0 670 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 GLT8D2Q9H1C3 349 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
PCNX4-209ENST00000555569 NID2Q14112 1375 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 SMCO2A6NFE2 343 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 DLL1O00548 723 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 MAFGO15525 162 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 TREHO43280 583 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 GNAT1P11488 350 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 PSMA5P28066 241 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 TCF7P36402 384 aaPredicted RBP15.8■□□□□ 0.12
PCNX4-209ENST00000555569 THPOP40225 353 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 KCNJ6P48051 423 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 WDR5P61964 334 aaKnown RBP15.8■□□□□ 0.12
PCNX4-209ENST00000555569 FBXL16Q8N461 479 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
PCNX4-209ENST00000555569 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms